RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 ARPP21Q9UBL0 812 aaPredicted RBP9.45□□□□□ -0.9
KPNB1-210ENST00000580573 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
KPNB1-210ENST00000580573 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
KPNB1-210ENST00000580573 CPA1P15085 419 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 BTDP43251 543 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 ANTXR2P58335 489 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 PPARAQ07869 468 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 ANKRD1Q15327 319 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 AKNAD1Q5T1N1 836 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 CTR9Q6PD62 1173 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 SH3RF3Q8TEJ3 882 aaPredicted RBP9.44□□□□□ -0.9
KPNB1-210ENST00000580573 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
KPNB1-210ENST00000580573 SERPINA10Q9UK55 444 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 ZNRF3Q9ULT6 936 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 TTF2Q9UNY4 1162 aaKnown RBP9.44□□□□□ -0.9
KPNB1-210ENST00000580573 NEDD4P46934 1319 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 NID2Q14112 1375 aa9.44□□□□□ -0.9
KPNB1-210ENST00000580573 FLT1P17948 1338 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 ORC4O43929 436 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 APPP05067 770 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 TDO2P48775 406 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 MMP14P50281 582 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 PRELPP51888 382 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 HAND2P61296 217 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 ST3GAL1Q11201 340 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 C12orf60Q5U649 245 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 TEKT1Q969V4 418 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 ZNF277Q9NRM2 450 aaPredicted RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
KPNB1-210ENST00000580573 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 MYH6P13533 1939 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 MYH15Q9Y2K3 1946 aa9.43□□□□□ -0.9
KPNB1-210ENST00000580573 WDHD1O75717 1129 aaPredicted RBP9.42□□□□□ -0.9
KPNB1-210ENST00000580573 LARGE1O95461 756 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 C7P10643 843 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 MCM5P33992 734 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 CRKP46108 304 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 ME3Q16798 604 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 Q6ZUG5 572 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 ZBED3Q96IU2 234 aaPredicted RBP9.42□□□□□ -0.9
KPNB1-210ENST00000580573 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 KRT23Q9C075 422 aa9.42□□□□□ -0.9
KPNB1-210ENST00000580573 FHDC1Q9C0D6 1143 aaPredicted RBP9.42□□□□□ -0.9
KPNB1-210ENST00000580573 ATRNL1Q5VV63 1379 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 USP17L21D6R901 530 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 FZD9O00144 591 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 PSMD14O00487 310 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 FOXK1P85037 733 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 MFSD6Q6ZSS7 791 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 CYB5R4Q7L1T6 521 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
KPNB1-210ENST00000580573 RALYLQ86SE5 291 aaKnown RBP9.41□□□□□ -0.9
KPNB1-210ENST00000580573 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 IGDCC4Q8TDY8 1250 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
KPNB1-210ENST00000580573 TMEM87BQ96K49 555 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 TCEANC2Q96MN5 208 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 NOL10Q9BSC4 688 aaKnown RBP9.41□□□□□ -0.9
KPNB1-210ENST00000580573 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
KPNB1-210ENST00000580573 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
KPNB1-210ENST00000580573 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
KPNB1-210ENST00000580573 B4E1Z4 1266 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 SH2B2O14492 632 aaPredicted RBP9.4□□□□□ -0.9
KPNB1-210ENST00000580573 PRC1O43663 620 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 PFKFB2O60825 505 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 LIFRP42702 1097 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 RCAN1P53805 252 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 CXCL9Q07325 125 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 TRDNQ13061 729 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 DSG2Q14126 1118 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 CDC42EP5Q6NZY7 148 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 KIAA0825Q8IV33 1275 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.9
KPNB1-210ENST00000580573 MYH4Q9Y623 1939 aa9.4□□□□□ -0.9
KPNB1-210ENST00000580573 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 RPS12P25398 132 aaKnown RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 USP5P45974 858 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms