RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 CTGFP29279 349 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
KPNB1-209ENST00000580158 SNAPC2Q13487 334 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 COPS6Q7L5N1 327 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 DIS3LQ8TF46 1054 aaKnown RBP7.84□□□□□ -1.15
KPNB1-209ENST00000580158 LBHD1Q9BQE6 289 aaPredicted RBP7.84□□□□□ -1.15
KPNB1-209ENST00000580158 COA1Q9GZY4 146 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 C11orf49Q9H6J7 331 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 PAK6Q9NQU5 681 aaPredicted RBP7.84□□□□□ -1.15
KPNB1-209ENST00000580158 EYSQ5T1H1 3165 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 SPEF2Q9C093 1822 aa7.84□□□□□ -1.15
KPNB1-209ENST00000580158 MED23Q9ULK4 1368 aa7.84□□□□□ -1.16
KPNB1-209ENST00000580158 COL4A1P02462 1669 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 TCF20Q9UGU0 1960 aaKnown RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 CLRN2A0PK11 232 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 WNT7AO00755 349 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 IRS4O14654 1257 aaPredicted RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 VGLL4Q14135 290 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 RASA3Q14644 834 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 RTL5Q5HYW3 569 aaPredicted RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 ERO1BQ86YB8 467 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 ANKRD18AQ8IVF6 992 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 RSPH6AQ9H0K4 717 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
KPNB1-209ENST00000580158 NUDCQ9Y266 331 aa7.83□□□□□ -1.16
KPNB1-209ENST00000580158 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 COL2A1P02458 1487 aaPredicted RBP7.82□□□□□ -1.16
KPNB1-209ENST00000580158 AK9Q5TCS8 1911 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 SPDYE5A6NIY4 337 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 NEFMP07197 916 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 ELNP15502 786 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 RBM5P52756 815 aaKnown RBP eCLIP7.82□□□□□ -1.16
KPNB1-209ENST00000580158 GTF2IP78347 998 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 CCDC152Q4G0S7 254 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
KPNB1-209ENST00000580158 XAGE3Q8WTP9 111 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 ATXN2LQ8WWM7 1075 aaKnown RBP7.82□□□□□ -1.16
KPNB1-209ENST00000580158 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 GABRQQ9UN88 632 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 NCOR1O75376 2440 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 MYH3P11055 1940 aa7.82□□□□□ -1.16
KPNB1-209ENST00000580158 MYO9BQ13459 2157 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 MUC3AQ02505 3323 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 KDM4AO75164 1064 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 ANXA1P04083 346 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 CD46P15529 392 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 TNNI2P48788 182 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 FLT3LGP49771 235 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 MMP16P51512 607 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 TRIM32Q13049 653 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 IRF5Q13568 498 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 CFAP100Q494V2 611 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 LRP10Q7Z4F1 713 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 ANKRD23Q86SG2 305 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 UHRF1Q96T88 793 aaPredicted RBP7.81□□□□□ -1.16
KPNB1-209ENST00000580158 USB1Q9BQ65 265 aaKnown RBP7.81□□□□□ -1.16
KPNB1-209ENST00000580158 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.81□□□□□ -1.16
KPNB1-209ENST00000580158 COL3A1P02461 1466 aaPredicted RBP7.81□□□□□ -1.16
KPNB1-209ENST00000580158 ARAP2Q8WZ64 1704 aa7.81□□□□□ -1.16
KPNB1-209ENST00000580158 PDHXO00330 501 aa7.8□□□□□ -1.16
KPNB1-209ENST00000580158 IRF6O14896 467 aa7.8□□□□□ -1.16
KPNB1-209ENST00000580158 CCT4P50991 539 aaKnown RBP7.8□□□□□ -1.16
KPNB1-209ENST00000580158 PPIL2Q13356 520 aa7.8□□□□□ -1.16
KPNB1-209ENST00000580158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.8□□□□□ -1.16
KPNB1-209ENST00000580158 ADAMTS19Q8TE59 1207 aa7.8□□□□□ -1.16
KPNB1-209ENST00000580158 PRMT6Q96LA8 375 aaPredicted RBP7.8□□□□□ -1.16
KPNB1-209ENST00000580158 CFAP53Q96M91 514 aa7.8□□□□□ -1.16
KPNB1-209ENST00000580158 F8W031 263 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 TNPO2O14787 897 aaKnown RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 USP46P62068 366 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 MAP2K5Q13163 448 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 PROSER3Q2NL68 480 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 CC2D1BQ5T0F9 858 aaKnown RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 PLBD2Q8NHP8 589 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 COA7Q96BR5 231 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 ASB2Q96Q27 587 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 CDC5LQ99459 802 aaKnown RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 PARK7Q99497 189 aaKnown RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 ISCA1Q9BUE6 129 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 HMX1Q9NP08 348 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-209ENST00000580158 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
KPNB1-209ENST00000580158 PDE8AO60658 829 aa7.78□□□□□ -1.16
KPNB1-209ENST00000580158 WFS1O76024 890 aa7.78□□□□□ -1.16
KPNB1-209ENST00000580158 SMPD1P17405 629 aa7.78□□□□□ -1.16
KPNB1-209ENST00000580158 MRPS5P82675 430 aaKnown RBP7.78□□□□□ -1.16
KPNB1-209ENST00000580158 SMAD3P84022 425 aaKnown RBP7.78□□□□□ -1.16
KPNB1-209ENST00000580158 PPATQ06203 517 aa7.78□□□□□ -1.16
KPNB1-209ENST00000580158 ZBTB38Q8NAP3 1195 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms