RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
COPS3-215ENST00000578317 JDP2Q8WYK2 163 aa9.65□□□□□ -0.86
COPS3-215ENST00000578317 DBNDD1Q9H9R9 158 aa9.65□□□□□ -0.86
COPS3-215ENST00000578317 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.86
COPS3-215ENST00000578317 TCRBV5S4A2TA0A5A2 114 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 YDJCA8MPS7 323 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.874e-7■■■□□ 18.9
COPS3-215ENST00000578317 LMNB1P20700 586 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 ADD2P35612 726 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 MMP14P50281 582 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 CHAF1AQ13111 956 aaPredicted RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 DACT2Q5SW24 774 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 SLC9C2Q5TAH2 1124 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 RUFY2Q8WXA3 655 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 HELLSQ9NRZ9 838 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 ABCF2Q9UG63 623 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 CACNA1SQ13698 1873 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 COL1A1P02452 1464 aaPredicted RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 FZD9O00144 591 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 IDH1O75874 414 aaKnown RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 LDHBP07195 334 aaKnown RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 CFHP08603 1231 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 PRELPP51888 382 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 MFSD14BQ5SR56 506 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 ZMYM1Q5SVZ6 1142 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 GLMNQ92990 594 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 WNT2BQ93097 391 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 NSUN4Q96CB9 384 aaKnown RBP9.64□□□□□ -0.87
COPS3-215ENST00000578317 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 DIAPH3Q9NSV4 1193 aa9.64□□□□□ -0.87
COPS3-215ENST00000578317 SGSM2O43147 1006 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 PDE6AP16499 860 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 GSTO1P78417 241 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 HDLBPQ00341 1268 aaKnown RBP9.63□□□□□ -0.87
COPS3-215ENST00000578317 CXCL9Q07325 125 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 MCMDC2Q4G0Z9 681 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 APPBP2Q92624 585 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 GMLQ99445 158 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 ARAP2Q8WZ64 1704 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 MYO3BQ8WXR4 1341 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 RAD50Q92878 1312 aa9.63□□□□□ -0.87
COPS3-215ENST00000578317 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 POM121CA8CG34 1229 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 LDHCP07864 332 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 PRDX5P30044 214 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 PPP4CP60510 307 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 MECOMQ03112 1051 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 TNIP1Q15025 636 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 GPR162Q16538 588 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 CWC27Q6UX04 472 aaKnown RBP9.62□□□□□ -0.87
COPS3-215ENST00000578317 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 CERS5Q8N5B7 392 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 AGBL3Q8NEM8 1001 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 ZNF384Q8TF68 577 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 HLA-CQ95604 372 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 OSBP2Q969R2 916 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 FAM227BQ96M60 508 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
COPS3-215ENST00000578317 REC8O95072 547 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 MFAP1P55081 439 aaKnown RBP9.61□□□□□ -0.87
COPS3-215ENST00000578317 RASSF7Q02833 373 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 NMIQ13287 307 aaPredicted RBP9.61□□□□□ -0.87
COPS3-215ENST00000578317 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
COPS3-215ENST00000578317 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 ARFGEF1Q9Y6D6 1849 aa9.61□□□□□ -0.87
COPS3-215ENST00000578317 A0A0D9SFI3 127 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 PSMD14O00487 310 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 MAST3O60307 1309 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 RAD17O75943 681 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 CHGBP05060 677 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 CYP7A1P22680 504 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 EIF6P56537 245 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 FUT2Q10981 343 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 GRIK5Q16478 980 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 HHIPL2Q6UWX4 724 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 DZIP1Q86YF9 867 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 DPF2Q92785 391 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 PUS7LQ9H0K6 701 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 PCDHGC3Q9UN70 934 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 GAKO14976 1311 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 GPR75-ASB3A0A0A6YYF3 556 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 MTMR2Q13614 643 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
COPS3-215ENST00000578317 STRBPQ96SI9 672 aaKnown RBP9.6□□□□□ -0.87
COPS3-215ENST00000578317 SEC62Q99442 399 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms