RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 VDRP11473 427 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 TRIM27P14373 513 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 AMPHP49418 695 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 SH3BGRP55822 239 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 CHMP4BP1P59074 171 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 THEMIS2Q5TEJ8 643 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 ARMC3Q5W041 872 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 SRGAP1Q7Z6B7 1085 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 CCDC146Q8IYE0 955 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 MYOCDQ8IZQ8 938 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 TEX9Q8N6V9 391 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 CAPS2Q9BXY5 557 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 THRAP3Q9Y2W1 955 aaKnown RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 ADGRL2O95490 1459 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 ADGRL3Q9HAR2 1447 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 DUOX2Q9NRD8 1548 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 FRMD3A2A2Y4 597 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 B4DLN1 442 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 FIBPO43427 364 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 MGRN1O60291 552 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 ATP6V1G1O75348 118 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 PENKP01210 267 aaPredicted RBP9□□□□□ -0.97
TOM1L1-220ENST00000575333 RPL13P26373 211 aaKnown RBP9□□□□□ -0.97
TOM1L1-220ENST00000575333 CNGA1P29973 690 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 TRPC1P48995 793 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 MAP2K5Q13163 448 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 STX1AQ16623 288 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 CYB5D1Q6P9G0 228 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 NME8Q8N427 588 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 BHMTQ93088 406 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 JAKMIP1Q96N16 626 aaKnown RBP9□□□□□ -0.97
TOM1L1-220ENST00000575333 RUFY1Q96T51 708 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
TOM1L1-220ENST00000575333 TNNQ9UQP3 1299 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 NOS1P29475 1434 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 PRAG1Q86YV5 1406 aa9□□□□□ -0.97
TOM1L1-220ENST00000575333 EVC2Q86UK5 1308 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 BECN2A8MW95 431 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 N4BP1O75113 896 aaKnown RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 SKAP2O75563 359 aaPredicted RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 ZFXP17010 805 aaPredicted RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 ATP2B2Q01814 1243 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 POSTNQ15063 836 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 KIAA0753Q2KHM9 967 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 WDR93Q6P2C0 686 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 GGT6Q6P531 493 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 GET4Q7L5D6 327 aaPredicted RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 LCA5Q86VQ0 697 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 CCDC13Q8IYE1 715 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 SMYD1Q8NB12 490 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 SMARCC2Q8TAQ2 1214 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 FAM81BQ96LP2 452 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 SCLT1Q96NL6 688 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 PLEKHA4Q9H4M7 779 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 LUC7LQ9NQ29 371 aaKnown RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 BARX2Q9UMQ3 279 aaPredicted RBP8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 AGLP35573 1532 aa8.99□□□□□ -0.97
TOM1L1-220ENST00000575333 GNAI3P08754 354 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 VIL1P09327 827 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 PTPREP23469 700 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 KRT85P78386 507 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 BLMHQ13867 455 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 Q4G0T1 1027 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 POTEEQ6S8J3 1075 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 SEPT14Q6ZU15 432 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 KCNK17Q96T54 332 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 ZWILCHQ9H900 591 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 G3BP2Q9UN86 482 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 RIPOR2Q9Y4F9 1068 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 MINK1Q8N4C8 1332 aaPredicted RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 A6NHS1 94 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 NDUFAB1O14561 156 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 EIF4BP23588 611 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 SKOR1P84550 965 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 MPP3Q13368 585 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 ARMC9Q7Z3E5 817 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 PHC3Q8NDX5 983 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 YIPF3Q9GZM5 350 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 CENPHQ9H3R5 247 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 KAT14Q9H8E8 782 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 ANKZF1Q9H8Y5 726 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 TUBA8Q9NY65 449 aaPredicted RBP8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 TMCO1Q9UM00 188 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 C15orf41Q9Y2V0 281 aa8.98□□□□□ -0.97
TOM1L1-220ENST00000575333 MADDQ8WXG6 1647 aa8.97□□□□□ -0.97
TOM1L1-220ENST00000575333 ADAMTSL3P82987 1691 aa8.97□□□□□ -0.97
TOM1L1-220ENST00000575333 TMEM232C9JQI7 657 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms