RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 GJB1P08034 283 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 PLCG2P16885 1265 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 MCAMP43121 646 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 GJA8P48165 433 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
CCDC40-210ENST00000573903 PROCA1Q8NCQ7 364 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-210ENST00000573903 ZNF384Q8TF68 577 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 COA7Q96BR5 231 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 HTATIP2Q9BUP3 242 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 TRIM34Q9BYJ4 488 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 AS3MTQ9HBK9 375 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 HERC5Q9UII4 1024 aaKnown RBP14.96□□□□□ -0.01
CCDC40-210ENST00000573903 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
CCDC40-210ENST00000573903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-210ENST00000573903 LOC285556D6RIA3 1793 aa14.96□□□□□ -0.02
CCDC40-210ENST00000573903 ADCY3O60266 1144 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 SLURP2P0DP57 97 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 FLT3LGP49771 235 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 NAA16Q6N069 864 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-210ENST00000573903 CCDC84Q86UT8 332 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-210ENST00000573903 TMEM57Q8N5G2 664 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 DPF3Q92784 378 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 SHISA4Q96DD7 197 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 DHX36Q9H2U1 1008 aaKnown RBP14.95□□□□□ -0.02
CCDC40-210ENST00000573903 GPR108Q9NPR9 543 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-210ENST00000573903 TAOK2Q9UL54 1235 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 GABRQQ9UN88 632 aa14.95□□□□□ -0.02
CCDC40-210ENST00000573903 CAP2P40123 477 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 SPP2Q13103 211 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 FAM110CQ1W6H9 321 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 TNNI3KQ59H18 835 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 ANKRD13CQ8N6S4 541 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 PXYLP1Q8TE99 480 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 AATFQ9NY61 560 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC40-210ENST00000573903 PI4KBQ9UBF8 816 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 FPGT-TNNI3KV9GXZ4 949 aa14.94□□□□□ -0.02
CCDC40-210ENST00000573903 USP17L5A8MUK1 530 aa14.93□□□□□ -0.02
CCDC40-210ENST00000573903 H0YGN5 161 aa14.93□□□□□ -0.02
CCDC40-210ENST00000573903 SURF6O75683 361 aaKnown RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 GCLCP48506 637 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 IRF5Q13568 498 aa14.93□□□□□ -0.02
CCDC40-210ENST00000573903 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
CCDC40-210ENST00000573903 CRACR2BQ8N4Y2 399 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 U2AF1L4Q8WU68 220 aaKnown RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 SNRKQ9NRH2 765 aa14.93□□□□□ -0.02
CCDC40-210ENST00000573903 COLQQ9Y215 455 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-210ENST00000573903 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 IGSF3O75054 1194 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-210ENST00000573903 INHAP05111 366 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 CAPN2P17655 700 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 HMGCS2P54868 508 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 POLA2Q14181 598 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 ITPRIPQ8IWB1 547 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 DBNDD2Q9BQY9 259 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 UNC93B1Q9H1C4 597 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 CDK5RAP2Q96SN8 1893 aa14.92□□□□□ -0.02
CCDC40-210ENST00000573903 HLA-DOAP06340 250 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 ASNSP08243 561 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 ELNP15502 786 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-210ENST00000573903 ATP8B2P98198 1209 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 TGFBRAP1Q8WUH2 860 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 TMOD4Q9NZQ9 345 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 FLT1P17948 1338 aa14.91□□□□□ -0.02
CCDC40-210ENST00000573903 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
CCDC40-210ENST00000573903 SGPL1O95470 568 aa14.9□□□□□ -0.02
CCDC40-210ENST00000573903 FXR1P51114 621 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCDC40-210ENST00000573903 SH3D19Q5HYK7 790 aa14.9□□□□□ -0.02
CCDC40-210ENST00000573903 ZNF512BQ96KM6 892 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-210ENST00000573903 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
CCDC40-210ENST00000573903 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
CCDC40-210ENST00000573903 TFRCP02786 760 aaKnown RBP14.89□□□□□ -0.03
CCDC40-210ENST00000573903 CYP2E1P05181 493 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-210ENST00000573903 ZAP70P43403 619 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 PPP4CP60510 307 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 MTMR2Q13614 643 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 CERS3Q8IU89 383 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 FOXP4Q8IVH2 680 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-210ENST00000573903 DEFB118Q96PH6 123 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-210ENST00000573903 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
CCDC40-210ENST00000573903 BACE1P56817 501 aa14.88□□□□□ -0.03
CCDC40-210ENST00000573903 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
CCDC40-210ENST00000573903 MYH1P12882 1939 aa14.88□□□□□ -0.03
CCDC40-210ENST00000573903 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
CCDC40-210ENST00000573903 C19orf81C9J6K1 198 aa14.87□□□□□ -0.03
CCDC40-210ENST00000573903 IDH1O75874 414 aaKnown RBP14.87□□□□□ -0.03
CCDC40-210ENST00000573903 HMGCRP04035 888 aa14.87□□□□□ -0.03
CCDC40-210ENST00000573903 CYP7A1P22680 504 aa14.87□□□□□ -0.03
CCDC40-210ENST00000573903 RRP1BQ14684 758 aaKnown RBP14.87□□□□□ -0.03
CCDC40-210ENST00000573903 UBE2Q1Q7Z7E8 422 aa14.87□□□□□ -0.03
CCDC40-210ENST00000573903 ADGRA1Q86SQ6 560 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms