RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
NDE1-207ENST00000573203 RHBDL3P58872 404 aa11.07□□□□□ -0.64
NDE1-207ENST00000573203 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
NDE1-207ENST00000573203 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
NDE1-207ENST00000573203 DDX4Q9NQI0 724 aaKnown RBP11.07□□□□□ -0.64
NDE1-207ENST00000573203 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
NDE1-207ENST00000573203 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 IGSF3O75054 1194 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 IDH1O75874 414 aaKnown RBP11.06□□□□□ -0.64
NDE1-207ENST00000573203 BAG3O95817 575 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 INPP5BP32019 993 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 GTF2A2P52657 109 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 DGKZQ13574 1117 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 AAMPQ13685 434 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
NDE1-207ENST00000573203 PIH1D3Q9NQM4 214 aaKnown RBP11.06□□□□□ -0.64
NDE1-207ENST00000573203 CCL15-CCL14A0A0B4J2E2 113 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
NDE1-207ENST00000573203 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
NDE1-207ENST00000573203 GPR25O00155 361 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
NDE1-207ENST00000573203 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
NDE1-207ENST00000573203 CCL15Q16663 113 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
NDE1-207ENST00000573203 ABHD8Q96I13 439 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 MCOLN1Q9GZU1 580 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
NDE1-207ENST00000573203 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
NDE1-207ENST00000573203 CDK5RAP2Q96SN8 1893 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 CYP7A1P22680 504 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 PPATQ06203 517 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 PPIL2Q13356 520 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 ZNF296Q8WUU4 475 aaPredicted RBP11.04□□□□□ -0.64
NDE1-207ENST00000573203 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 PTPN18Q99952 460 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 LRRCC1Q9C099 1032 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
NDE1-207ENST00000573203 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 FOCADQ5VW36 1801 aa11.04□□□□□ -0.64
NDE1-207ENST00000573203 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 IRF6O14896 467 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 FKTNO75072 461 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 CETPP11597 493 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 PPP4CP60510 307 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 SNAPC2Q13487 334 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 NOL9Q5SY16 702 aaKnown RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 MAGEB6Q8N7X4 407 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
NDE1-207ENST00000573203 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
NDE1-207ENST00000573203 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
NDE1-207ENST00000573203 DOCK1Q14185 1865 aa11.02□□□□□ -0.64
NDE1-207ENST00000573203 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 GOLIM4O00461 696 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 STK25O00506 426 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 SMARCA5O60264 1052 aaPredicted RBP11.02□□□□□ -0.65
NDE1-207ENST00000573203 SLURP2P0DP57 97 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
NDE1-207ENST00000573203 MAP3K10Q02779 954 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 CRHR2Q13324 411 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 TAF1CQ15572 869 aaPredicted RBP11.02□□□□□ -0.65
NDE1-207ENST00000573203 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
NDE1-207ENST00000573203 CERS3Q8IU89 383 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 SCYL3Q8IZE3 742 aa11.02□□□□□ -0.65
NDE1-207ENST00000573203 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.02□□□□□ -0.65
NDE1-207ENST00000573203 MYH1P12882 1939 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 ATAD5Q96QE3 1844 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 CCDC85CA6NKD9 419 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 TBC1D12O60347 775 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 CTNND1O60716 968 aaKnown RBP11.01□□□□□ -0.65
NDE1-207ENST00000573203 MAPKAPK5Q8IW41 473 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 FAM43AQ8N2R8 423 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 DHX36Q9H2U1 1008 aaKnown RBP11.01□□□□□ -0.65
NDE1-207ENST00000573203 BOLA2Q9H3K6 86 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 DCTPP1Q9H773 170 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 ZFYVE28Q9HCC9 887 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 FLT1P17948 1338 aa11.01□□□□□ -0.65
NDE1-207ENST00000573203 BTBD19C9JJ37 291 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PTPRAP18433 802 aa11□□□□□ -0.65
NDE1-207ENST00000573203 ATP5JP18859 108 aa11□□□□□ -0.65
NDE1-207ENST00000573203 USP5P45974 858 aa11□□□□□ -0.65
NDE1-207ENST00000573203 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
NDE1-207ENST00000573203 SLC9C2Q5TAH2 1124 aa11□□□□□ -0.65
NDE1-207ENST00000573203 EXOC6Q8TAG9 804 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms