RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SNRPA1P09661 255 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 IFIT2P09913 472 aaKnown RBP9.36□□□□□ -0.91
TCF4-246ENST00000570287 ETFBP38117 255 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 SEC13P55735 322 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 PLEKHG4Q58EX7 1191 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 ARPC5LQ9BPX5 153 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 PRKD2Q9BZL6 878 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 FAM53CQ9NYF3 392 aa9.36□□□□□ -0.91
TCF4-246ENST00000570287 COL9A1P20849 921 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 G3BP1Q13283 466 aaKnown RBP eCLIP9.35□□□□□ -0.91
TCF4-246ENST00000570287 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 TTC5Q8N0Z6 440 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 KIAA1524Q8TCG1 905 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 RUFY2Q8WXA3 655 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 METTL22Q9BUU2 404 aaPredicted RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 PARP4Q9UKK3 1724 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 CYP27B1O15528 508 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 GCGRP47871 477 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 PPP4CP60510 307 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 PRPF38AQ8NAV1 312 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 XAGE3Q8WTP9 111 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 OCSTAMPQ9BR26 566 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 CFHR5Q9BXR6 569 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
TCF4-246ENST00000570287 PA2G4Q9UQ80 394 aaKnown RBP9.35□□□□□ -0.91
TCF4-246ENST00000570287 CCDC96Q2M329 555 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 CCDC66A2RUB6 948 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 MYL6BP14649 208 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 NCBP1Q09161 790 aaKnown RBP9.34□□□□□ -0.91
TCF4-246ENST00000570287 GCKRQ14397 625 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 DALRD3Q5D0E6 543 aaKnown RBP9.34□□□□□ -0.91
TCF4-246ENST00000570287 TTC39BQ5VTQ0 682 aaPredicted RBP9.34□□□□□ -0.91
TCF4-246ENST00000570287 ZNF771Q7L3S4 317 aaPredicted RBP9.34□□□□□ -0.91
TCF4-246ENST00000570287 COPS6Q7L5N1 327 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 LRP10Q7Z4F1 713 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 AACSQ86V21 672 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 SIX5Q8N196 739 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 HELQQ8TDG4 1101 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 COPRSQ9NQ92 184 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 MAP10Q9P2G4 905 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 FUT2Q10981 343 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 RASA3Q14644 834 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 TERF2Q15554 542 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 EML3Q32P44 896 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 ATCAYQ86WG3 371 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 GGT7Q9UJ14 662 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 SNX14Q9Y5W7 946 aa9.34□□□□□ -0.91
TCF4-246ENST00000570287 COL15A1P39059 1388 aa9.34□□□□□ -0.92
TCF4-246ENST00000570287 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 SASH1O94885 1247 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 CHMP4BP1P59074 171 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 CWC27Q6UX04 472 aaKnown RBP9.33□□□□□ -0.92
TCF4-246ENST00000570287 CREBRFQ8IUR6 639 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 LILRB2Q8N423 598 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 UPF3BQ9BZI7 483 aaKnown RBP9.33□□□□□ -0.92
TCF4-246ENST00000570287 BMP2KQ9NSY1 1161 aaPredicted RBP9.33□□□□□ -0.92
TCF4-246ENST00000570287 LAMB4A4D0S4 1761 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 HIP1O00291 1037 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 GJA8P48165 433 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 CABP4P57796 275 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 PODNQ7Z5L7 613 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 OTUD6BQ8N6M0 293 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 SYAP1Q96A49 352 aaPredicted RBP9.33□□□□□ -0.92
TCF4-246ENST00000570287 MYD88Q99836 296 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 USP16Q9Y5T5 823 aa9.33□□□□□ -0.92
TCF4-246ENST00000570287 GTF2IP78347 998 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 HSP90AB3PQ58FF7 597 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 ZNF654Q8IZM8 581 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 HNRNPLLQ8WVV9 542 aaKnown RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 FBXO9Q9UK97 447 aaPredicted RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 XIRP1Q702N8 1843 aaKnown RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 EAF2Q96CJ1 260 aaPredicted RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 TIGD1Q96MW7 591 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 TPM3P06753 285 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 PLCB3Q01970 1234 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 C17orf53Q8N3J3 647 aaPredicted RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 TTC14Q96N46 770 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 NRBP1Q9UHY1 535 aa9.32□□□□□ -0.92
TCF4-246ENST00000570287 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
TCF4-246ENST00000570287 GLI3P10071 1580 aa9.31□□□□□ -0.92
TCF4-246ENST00000570287 FZD6O60353 706 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms