RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 U2AF1L4Q8WU68 220 aaKnown RBP13.49□□□□□ -0.25
TMX3-210ENST00000569053 DPF3Q92784 378 aa13.49□□□□□ -0.25
TMX3-210ENST00000569053 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
TMX3-210ENST00000569053 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
TMX3-210ENST00000569053 ADCY3O60266 1144 aa13.48□□□□□ -0.25
TMX3-210ENST00000569053 CTNND1O60716 968 aaKnown RBP13.48□□□□□ -0.25
TMX3-210ENST00000569053 HOXD10P28358 340 aa13.48□□□□□ -0.25
TMX3-210ENST00000569053 SHROOM1Q2M3G4 852 aaPredicted RBP13.48□□□□□ -0.25
TMX3-210ENST00000569053 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
TMX3-210ENST00000569053 NSUN4Q96CB9 384 aaKnown RBP13.48□□□□□ -0.25
TMX3-210ENST00000569053 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
TMX3-210ENST00000569053 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
TMX3-210ENST00000569053 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 SGPL1O95470 568 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 INHAP05111 366 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 TRIM32Q13049 653 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 MTX1Q13505 466 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 FASTKD5Q7L8L6 764 aaKnown RBP13.47□□□□□ -0.25
TMX3-210ENST00000569053 ANKRD13CQ8N6S4 541 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
TMX3-210ENST00000569053 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
TMX3-210ENST00000569053 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
TMX3-210ENST00000569053 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
TMX3-210ENST00000569053 TBC1D12O60347 775 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 MCAMP43121 646 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 SPP2Q13103 211 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 DIS3LQ8TF46 1054 aaKnown RBP13.46□□□□□ -0.25
TMX3-210ENST00000569053 AGTPBP1Q9UPW5 1226 aa13.46□□□□□ -0.25
TMX3-210ENST00000569053 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 FARP2O94887 1054 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 IRF5Q13568 498 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 ADGRA1Q86SQ6 560 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 ZGPATQ8N5A5 531 aaKnown RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 SPATA5Q8NB90 893 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 SH3RF3Q8TEJ3 882 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMX3-210ENST00000569053 PAK6Q9NQU5 681 aaPredicted RBP13.45□□□□□ -0.26
TMX3-210ENST00000569053 GJD2Q9UKL4 321 aa13.45□□□□□ -0.26
TMX3-210ENST00000569053 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
TMX3-210ENST00000569053 BCAR3O75815 825 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 TRIM27P14373 513 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 UBXN2AP68543 259 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 NKX2-3Q8TAU0 364 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 PXYLP1Q8TE99 480 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
TMX3-210ENST00000569053 OSBPL5Q9H0X9 879 aaPredicted RBP13.44□□□□□ -0.26
TMX3-210ENST00000569053 CT47B1P0C2W7 299 aaPredicted RBP13.43□□□□□ -0.26
TMX3-210ENST00000569053 CAP2P40123 477 aa13.43□□□□□ -0.26
TMX3-210ENST00000569053 HMGCS2P54868 508 aa13.43□□□□□ -0.26
TMX3-210ENST00000569053 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
TMX3-210ENST00000569053 SPTY2D1Q68D10 685 aaPredicted RBP13.43□□□□□ -0.26
TMX3-210ENST00000569053 SMCR8Q8TEV9 937 aaPredicted RBP13.43□□□□□ -0.26
TMX3-210ENST00000569053 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
TMX3-210ENST00000569053 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
TMX3-210ENST00000569053 COL2A1P02458 1487 aaPredicted RBP13.42□□□□□ -0.26
TMX3-210ENST00000569053 FOCADQ5VW36 1801 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
TMX3-210ENST00000569053 ASCC2Q9H1I8 757 aaPredicted RBP13.42□□□□□ -0.26
TMX3-210ENST00000569053 TXNRD2Q9NNW7 524 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
TMX3-210ENST00000569053 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
TMX3-210ENST00000569053 GNAI3P08754 354 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
TMX3-210ENST00000569053 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 DBNDD2Q9BQY9 259 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
TMX3-210ENST00000569053 COL6A3P12111 3177 aa13.4□□□□□ -0.26
TMX3-210ENST00000569053 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
TMX3-210ENST00000569053 TRIB2Q92519 343 aa13.4□□□□□ -0.26
TMX3-210ENST00000569053 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
TMX3-210ENST00000569053 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMX3-210ENST00000569053 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
TMX3-210ENST00000569053 DDX60LQ5H9U9 1706 aaKnown RBP13.39□□□□□ -0.27
TMX3-210ENST00000569053 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
TMX3-210ENST00000569053 DYNLL1P63167 89 aaKnown RBP13.39□□□□□ -0.27
TMX3-210ENST00000569053 Q3C1V9 767 aa13.39□□□□□ -0.27
TMX3-210ENST00000569053 METTL16Q86W50 562 aaKnown RBP13.39□□□□□ -0.27
TMX3-210ENST00000569053 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
TMX3-210ENST00000569053 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
TMX3-210ENST00000569053 TGFBRAP1Q8WUH2 860 aa13.39□□□□□ -0.27
TMX3-210ENST00000569053 COA7Q96BR5 231 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms