RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 GPAA1O43292 621 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 MTF1Q14872 753 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 APOA5Q6Q788 366 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 CYB5R4Q7L1T6 521 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.46
COMMD4-215ENST00000566843 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 L1RE1Q9UN81 338 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 STK36Q9NRP7 1315 aa17.89■□□□□ 0.46
COMMD4-215ENST00000566843 ERCC5P28715 1186 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-215ENST00000566843 HSP90AA4PQ58FG1 418 aa17.89■□□□□ 0.45
COMMD4-215ENST00000566843 CT47A1Q5JQC4 288 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-215ENST00000566843 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
COMMD4-215ENST00000566843 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-215ENST00000566843 IRX2Q9BZI1 471 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-215ENST00000566843 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
COMMD4-215ENST00000566843 PDE11AQ9HCR9 933 aa17.89■□□□□ 0.45
COMMD4-215ENST00000566843 SOWAHDA6NJG2 315 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 ERLIN1O75477 346 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PRR29P0C7W0 189 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 TATP17735 454 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PTPREP23469 700 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PLCD1P51178 756 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 TRDNQ13061 729 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 RAD9BQ6WBX8 426 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 SPATA20Q8TB22 786 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 XAGE2Q96GT9 111 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 FBXO2Q9UK22 296 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 AHDC1Q5TGY3 1603 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 IVLP07476 585 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 FECHP22830 423 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 ADORA1P30542 326 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PBX1P40424 430 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 TRIM29Q14134 588 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 RASGRP2Q7LDG7 609 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 NKX2-3Q8TAU0 364 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PHKBQ93100 1093 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 PNKPQ96T60 521 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 SAMSN1Q9NSI8 373 aaKnown RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 SERTAD1Q9UHV2 236 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
COMMD4-215ENST00000566843 RRP15Q9Y3B9 282 aaKnown RBP17.88■□□□□ 0.45
COMMD4-215ENST00000566843 KIF5CO60282 957 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 EIF3JO75822 258 aaKnown RBP17.87■□□□□ 0.45
COMMD4-215ENST00000566843 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 TMEM87BQ96K49 555 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NBPF26B4DH59 902 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 ZAP70P43403 619 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 SCARF1Q14162 830 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NBPF10Q6P3W6 841 aaKnown RBP17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NOSTRINQ8IVI9 506 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 TRMT44Q8IYL2 757 aaKnown RBP17.87■□□□□ 0.45
COMMD4-215ENST00000566843 NBPF15Q8N660 670 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 MEGF6O75095 1541 aa17.87■□□□□ 0.45
COMMD4-215ENST00000566843 ATRNO75882 1429 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 TRIM66O15016 1216 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 TOB1P50616 345 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-215ENST00000566843 KANK3Q6NY19 840 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 SGMS1Q86VZ5 419 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 VPS18Q9P253 973 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 ZBTB43O43298 467 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 ACTN4O43707 911 aaKnown RBP17.86■□□□□ 0.45
COMMD4-215ENST00000566843 TUBBP07437 444 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 SLC9C2Q5TAH2 1124 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 LEKR1Q6ZMV7 388 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 ZSWIM4Q9H7M6 989 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 LZTFL1Q9NQ48 299 aa17.86■□□□□ 0.45
COMMD4-215ENST00000566843 PUF60Q9UHX1 559 aaKnown RBP17.86■□□□□ 0.45
COMMD4-215ENST00000566843 COL18A1P39060 1754 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
COMMD4-215ENST00000566843 POLR2DO15514 142 aaKnown RBP17.85■□□□□ 0.45
COMMD4-215ENST00000566843 TEX33O43247 280 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 RBL2Q08999 1139 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 SPECC1Q5M775 1068 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 C10orf67Q8IYJ2 551 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 CERKQ8TCT0 537 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
COMMD4-215ENST00000566843 FMNL1O95466 1100 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-215ENST00000566843 RXRAP19793 462 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 GRIN1Q05586 938 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 MCM6Q14566 821 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
COMMD4-215ENST00000566843 PPFIBP1Q86W92 1011 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms