RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 CCDC158Q5M9N0 1113 aa23.19■■□□□ 1.3
SPSB3-207ENST00000565550 CEP85Q6P2H3 762 aa23.19■■□□□ 1.3
SPSB3-207ENST00000565550 TEX11Q8IYF3 940 aa23.19■■□□□ 1.3
SPSB3-207ENST00000565550 SH3RF3Q8TEJ3 882 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-207ENST00000565550 SLC45A1Q9Y2W3 748 aa23.19■■□□□ 1.3
SPSB3-207ENST00000565550 FCGRTP55899 365 aa23.18■■□□□ 1.3
SPSB3-207ENST00000565550 MTFR1Q15390 333 aa23.18■■□□□ 1.3
SPSB3-207ENST00000565550 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
SPSB3-207ENST00000565550 GRK4P32298 578 aa23.17■■□□□ 1.3
SPSB3-207ENST00000565550 NAA16Q6N069 864 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-207ENST00000565550 GCC1Q96CN9 775 aa23.17■■□□□ 1.3
SPSB3-207ENST00000565550 NOL10Q9BSC4 688 aaKnown RBP23.17■■□□□ 1.3
SPSB3-207ENST00000565550 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPSB3-207ENST00000565550 CYP2E1P05181 493 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-207ENST00000565550 PRKCZQ05513 592 aa23.16■■□□□ 1.3
SPSB3-207ENST00000565550 RRP1BQ14684 758 aaKnown RBP23.16■■□□□ 1.3
SPSB3-207ENST00000565550 BAG3O95817 575 aa23.15■■□□□ 1.3
SPSB3-207ENST00000565550 CAP2P40123 477 aa23.15■■□□□ 1.3
SPSB3-207ENST00000565550 SPP2Q13103 211 aa23.15■■□□□ 1.3
SPSB3-207ENST00000565550 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-207ENST00000565550 GABRQQ9UN88 632 aa23.15■■□□□ 1.3
SPSB3-207ENST00000565550 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
SPSB3-207ENST00000565550 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
SPSB3-207ENST00000565550 COL2A1P02458 1487 aaPredicted RBP23.14■■□□□ 1.29
SPSB3-207ENST00000565550 PPP4CP60510 307 aa23.14■■□□□ 1.29
SPSB3-207ENST00000565550 TREML2Q5T2D2 321 aa23.14■■□□□ 1.29
SPSB3-207ENST00000565550 ZNF512BQ96KM6 892 aaPredicted RBP23.14■■□□□ 1.29
SPSB3-207ENST00000565550 BIN2Q9UBW5 565 aaPredicted RBP23.14■■□□□ 1.29
SPSB3-207ENST00000565550 ZAP70P43403 619 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 ADGRA1Q86SQ6 560 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 ZNF280CQ8ND82 737 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 TGFBRAP1Q8WUH2 860 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 CCDC8Q9H0W5 538 aaPredicted RBP23.13■■□□□ 1.29
SPSB3-207ENST00000565550 DHX36Q9H2U1 1008 aaKnown RBP23.13■■□□□ 1.29
SPSB3-207ENST00000565550 PI4KBQ9UBF8 816 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 HERC5Q9UII4 1024 aaKnown RBP23.13■■□□□ 1.29
SPSB3-207ENST00000565550 DBNLQ9UJU6 430 aaKnown RBP23.13■■□□□ 1.29
SPSB3-207ENST00000565550 DOCK1Q14185 1865 aa23.13■■□□□ 1.29
SPSB3-207ENST00000565550 PLCG2P16885 1265 aa23.12■■□□□ 1.29
SPSB3-207ENST00000565550 MAPKAPK5Q8IW41 473 aa23.12■■□□□ 1.29
SPSB3-207ENST00000565550 PIH1D3Q9NQM4 214 aaKnown RBP23.12■■□□□ 1.29
SPSB3-207ENST00000565550 TLR7Q9NYK1 1049 aaKnown RBP23.12■■□□□ 1.29
SPSB3-207ENST00000565550 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 USP17L5A8MUK1 530 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 CCL5P13501 91 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 FLT3LGP49771 235 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 PROCA1Q8NCQ7 364 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-207ENST00000565550 EAF2Q96CJ1 260 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-207ENST00000565550 SHISA4Q96DD7 197 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 CRBNQ96SW2 442 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
SPSB3-207ENST00000565550 TNPO2O14787 897 aaKnown RBP23.1■■□□□ 1.29
SPSB3-207ENST00000565550 HMGCS2P54868 508 aa23.1■■□□□ 1.29
SPSB3-207ENST00000565550 UBXN2AP68543 259 aa23.1■■□□□ 1.29
SPSB3-207ENST00000565550 HABP4Q5JVS0 413 aaKnown RBP23.1■■□□□ 1.29
SPSB3-207ENST00000565550 SLAIN1Q8ND83 568 aa23.1■■□□□ 1.29
SPSB3-207ENST00000565550 RNF208Q9H0X6 261 aa23.1■■□□□ 1.29
SPSB3-207ENST00000565550 PNMA3Q9UL41 463 aa23.1■■□□□ 1.29
SPSB3-207ENST00000565550 GJB1P08034 283 aa23.09■■□□□ 1.29
SPSB3-207ENST00000565550 NKX2-3Q8TAU0 364 aa23.09■■□□□ 1.29
SPSB3-207ENST00000565550 PCDH10Q9P2E7 1040 aa23.09■■□□□ 1.29
SPSB3-207ENST00000565550 EXOC6BQ9Y2D4 811 aa23.09■■□□□ 1.29
SPSB3-207ENST00000565550 FLT1P17948 1338 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 ADCY3O60266 1144 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 IGSF3O75054 1194 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 GJA8P48165 433 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 DYNLL1P63167 89 aaKnown RBP23.08■■□□□ 1.29
SPSB3-207ENST00000565550 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-207ENST00000565550 AS3MTQ9HBK9 375 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 PALD1Q9ULE6 856 aa23.08■■□□□ 1.29
SPSB3-207ENST00000565550 SUPT16HQ9Y5B9 1047 aaKnown RBP23.08■■□□□ 1.29
SPSB3-207ENST00000565550 PTPRFP10586 1907 aa23.08■■□□□ 1.28
SPSB3-207ENST00000565550 ELNP15502 786 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 CYP7A1P22680 504 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 JAG1P78504 1218 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 PABPC4Q13310 644 aaKnown RBP eCLIP23.07■■□□□ 1.28
SPSB3-207ENST00000565550 FAM110CQ1W6H9 321 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 DNAJC18Q9H819 358 aa23.07■■□□□ 1.28
SPSB3-207ENST00000565550 IDH1O75874 414 aaKnown RBP23.06■■□□□ 1.28
SPSB3-207ENST00000565550 IRF5Q13568 498 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 METTL16Q86W50 562 aaKnown RBP23.06■■□□□ 1.28
SPSB3-207ENST00000565550 CRACR2BQ8N4Y2 399 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-207ENST00000565550 PXYLP1Q8TE99 480 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 COA7Q96BR5 231 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 WDR18Q9BV38 432 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 UNC93B1Q9H1C4 597 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 ASCC2Q9H1I8 757 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-207ENST00000565550 SAP30BPQ9UHR5 308 aaKnown RBP23.06■■□□□ 1.28
SPSB3-207ENST00000565550 NDUFB9Q9Y6M9 179 aa23.06■■□□□ 1.28
SPSB3-207ENST00000565550 ASNSP08243 561 aa23.05■■□□□ 1.28
SPSB3-207ENST00000565550 GCLCP48506 637 aaPredicted RBP23.05■■□□□ 1.28
SPSB3-207ENST00000565550 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
SPSB3-207ENST00000565550 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
SPSB3-207ENST00000565550 TAOK2Q9UL54 1235 aa23.05■■□□□ 1.28
SPSB3-207ENST00000565550 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
SPSB3-207ENST00000565550 H0YGN5 161 aa23.04■■□□□ 1.28
SPSB3-207ENST00000565550 INHAP05111 366 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms