RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 IFIT3O14879 490 aaKnown RBP13.24□□□□□ -0.29
SNX29-204ENST00000564791 EVCP57679 992 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 PDE4BQ07343 736 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 NFIAQ12857 509 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 ZNF274Q96GC6 653 aaPredicted RBP13.24□□□□□ -0.29
SNX29-204ENST00000564791 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 LY9Q9HBG7 655 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 SENP2Q9HC62 589 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
SNX29-204ENST00000564791 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
SNX29-204ENST00000564791 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
SNX29-204ENST00000564791 DTNBO60941 627 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
SNX29-204ENST00000564791 CACNB3P54284 484 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 SCRN1Q12765 414 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 TNIP1Q15025 636 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 PRMT6Q96LA8 375 aaPredicted RBP13.23□□□□□ -0.29
SNX29-204ENST00000564791 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
SNX29-204ENST00000564791 SMC3Q9UQE7 1217 aa13.23□□□□□ -0.29
SNX29-204ENST00000564791 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
SNX29-204ENST00000564791 FZD9O00144 591 aa13.22□□□□□ -0.29
SNX29-204ENST00000564791 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
SNX29-204ENST00000564791 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
SNX29-204ENST00000564791 RAB11FIP4Q86YS3 637 aa13.22□□□□□ -0.29
SNX29-204ENST00000564791 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
SNX29-204ENST00000564791 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
SNX29-204ENST00000564791 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
SNX29-204ENST00000564791 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 GJB2P29033 226 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 LIFRP42702 1097 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
SNX29-204ENST00000564791 WTAPQ15007 396 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 DLGAP5Q15398 846 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 FAM47AQ5JRC9 791 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 C16orf86Q6ZW13 317 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 SGMS1Q86VZ5 419 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 ZFPM1Q8IX07 1006 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 IDI2Q9BXS1 227 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
SNX29-204ENST00000564791 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 TNKSO95271 1327 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
SNX29-204ENST00000564791 SHTN1A0MZ66 631 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 ERICH2A1L162 156 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.34e-7■■■■□ 22.3
SNX29-204ENST00000564791 CDK8P49336 464 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 PKP1Q13835 747 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 SEC23AQ15436 765 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 APOA5Q6Q788 366 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 TTC6Q86TZ1 520 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.3
SNX29-204ENST00000564791 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.3
SNX29-204ENST00000564791 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 JAK2O60674 1132 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
SNX29-204ENST00000564791 LMNB1P20700 586 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 RASA1P20936 1047 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
SNX29-204ENST00000564791 TCP10Q12799 353 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
SNX29-204ENST00000564791 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
SNX29-204ENST00000564791 NMT2O60551 498 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 NT5C2P49902 561 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 GMPSP49915 693 aaPredicted RBP13.19□□□□□ -0.3
SNX29-204ENST00000564791 NUCB2P80303 420 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 TFAP4Q01664 338 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 GABPAQ06546 454 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 MICU3Q86XE3 530 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
SNX29-204ENST00000564791 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
SNX29-204ENST00000564791 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
SNX29-204ENST00000564791 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
SNX29-204ENST00000564791 CLRN2A0PK11 232 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 ZBTB43O43298 467 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 RXRAP19793 462 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 METAP2P50579 478 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNX29-204ENST00000564791 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
SNX29-204ENST00000564791 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
SNX29-204ENST00000564791 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
SNX29-204ENST00000564791 ZBED3Q96IU2 234 aaPredicted RBP13.18□□□□□ -0.3
SNX29-204ENST00000564791 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms