RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 CAPN2P17655 700 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 ARID4AP29374 1257 aaPredicted RBP17.4■□□□□ 0.38
CDR2-204ENST00000564542 FAM110CQ1W6H9 321 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 ANKRD13CQ8N6S4 541 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 NSUN4Q96CB9 384 aaKnown RBP17.4■□□□□ 0.38
CDR2-204ENST00000564542 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
CDR2-204ENST00000564542 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
CDR2-204ENST00000564542 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
CDR2-204ENST00000564542 GORABQ5T7V8 394 aa17.39■□□□□ 0.37
CDR2-204ENST00000564542 COA7Q96BR5 231 aa17.39■□□□□ 0.37
CDR2-204ENST00000564542 TBC1D9Q6ZT07 1266 aa17.38■□□□□ 0.37
CDR2-204ENST00000564542 ZNF280CQ8ND82 737 aa17.38■□□□□ 0.37
CDR2-204ENST00000564542 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
CDR2-204ENST00000564542 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
CDR2-204ENST00000564542 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
CDR2-204ENST00000564542 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 GNAI2P04899 355 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 MCAMP43121 646 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 GCLCP48506 637 aaPredicted RBP17.37■□□□□ 0.37
CDR2-204ENST00000564542 SPP2Q13103 211 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 DEFB118Q96PH6 123 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 PRO3102Q9H379 93 aa17.37■□□□□ 0.37
CDR2-204ENST00000564542 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
CDR2-204ENST00000564542 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
CDR2-204ENST00000564542 TRIM27P14373 513 aa17.36■□□□□ 0.37
CDR2-204ENST00000564542 CAP2P40123 477 aa17.36■□□□□ 0.37
CDR2-204ENST00000564542 HMGCS2P54868 508 aa17.36■□□□□ 0.37
CDR2-204ENST00000564542 PABPC4Q13310 644 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDR2-204ENST00000564542 TEX11Q8IYF3 940 aa17.36■□□□□ 0.37
CDR2-204ENST00000564542 HERC5Q9UII4 1024 aaKnown RBP17.36■□□□□ 0.37
CDR2-204ENST00000564542 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
CDR2-204ENST00000564542 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 USP17L5A8MUK1 530 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 TFRCP02786 760 aaKnown RBP17.35■□□□□ 0.37
CDR2-204ENST00000564542 UQCRFS1P1P0C7P4 283 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDR2-204ENST00000564542 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
CDR2-204ENST00000564542 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
CDR2-204ENST00000564542 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 LRP2BPQ9P2M1 347 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
CDR2-204ENST00000564542 SH3D19Q5HYK7 790 aa17.34■□□□□ 0.37
CDR2-204ENST00000564542 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
CDR2-204ENST00000564542 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
CDR2-204ENST00000564542 CDK5RAP2Q96SN8 1893 aa17.34■□□□□ 0.37
CDR2-204ENST00000564542 ASCC2Q9H1I8 757 aaPredicted RBP17.34■□□□□ 0.37
CDR2-204ENST00000564542 DHX36Q9H2U1 1008 aaKnown RBP17.34■□□□□ 0.37
CDR2-204ENST00000564542 AS3MTQ9HBK9 375 aa17.34■□□□□ 0.37
CDR2-204ENST00000564542 PI4KBQ9UBF8 816 aa17.34■□□□□ 0.37
CDR2-204ENST00000564542 EVI5O60447 810 aa17.33■□□□□ 0.36
CDR2-204ENST00000564542 HMGCRP04035 888 aa17.33■□□□□ 0.36
CDR2-204ENST00000564542 PLCG2P16885 1265 aa17.33■□□□□ 0.36
CDR2-204ENST00000564542 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDR2-204ENST00000564542 ALPK3Q96L96 1907 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 A0A1W2PPC1 479 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 BAG3O95817 575 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 NAA16Q6N069 864 aaPredicted RBP17.32■□□□□ 0.36
CDR2-204ENST00000564542 WDR18Q9BV38 432 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDR2-204ENST00000564542 TNNQ9UQP3 1299 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 PLXNB2O15031 1838 aa17.32■□□□□ 0.36
CDR2-204ENST00000564542 FLT1P17948 1338 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 ASNSP08243 561 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 MTMR2Q13614 643 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 TTC39AQ5SRH9 613 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
CDR2-204ENST00000564542 PAWRQ96IZ0 340 aaKnown RBP17.31■□□□□ 0.36
CDR2-204ENST00000564542 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 GJD2Q9UKL4 321 aa17.31■□□□□ 0.36
CDR2-204ENST00000564542 BCAR3O75815 825 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 BACE1P56817 501 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 PPP4CP60510 307 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
CDR2-204ENST00000564542 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 CCDC158Q5M9N0 1113 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 NECAB2Q7Z6G3 386 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
CDR2-204ENST00000564542 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 DNAJC18Q9H819 358 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
CDR2-204ENST00000564542 RPTORQ8N122 1335 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 IGSF3O75054 1194 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
CDR2-204ENST00000564542 POLA2Q14181 598 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
CDR2-204ENST00000564542 TGFBRAP1Q8WUH2 860 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 DBNDD2Q9BQY9 259 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
CDR2-204ENST00000564542 DDX60LQ5H9U9 1706 aaKnown RBP17.29■□□□□ 0.36
CDR2-204ENST00000564542 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms