RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 NAA16Q6N069 864 aaPredicted RBP29.3■■■□□ 2.28
NME3-206ENST00000564252 ZNF512BQ96KM6 892 aaPredicted RBP29.3■■■□□ 2.28
NME3-206ENST00000564252 ATAD5Q96QE3 1844 aa29.29■■■□□ 2.28
NME3-206ENST00000564252 DIEXFQ68CQ4 756 aaKnown RBP29.29■■■□□ 2.28
NME3-206ENST00000564252 NOL10Q9BSC4 688 aaKnown RBP29.29■■■□□ 2.28
NME3-206ENST00000564252 AATFQ9NY61 560 aaKnown RBP eCLIP29.29■■■□□ 2.28
NME3-206ENST00000564252 MYO5AQ9Y4I1 1855 aaKnown RBP29.29■■■□□ 2.28
NME3-206ENST00000564252 SIPA1L1O43166 1804 aa29.29■■■□□ 2.28
NME3-206ENST00000564252 RRP1BQ14684 758 aaKnown RBP29.28■■■□□ 2.28
NME3-206ENST00000564252 RAET1EQ8TD07 263 aa29.28■■■□□ 2.28
NME3-206ENST00000564252 DBNLQ9UJU6 430 aaKnown RBP29.28■■■□□ 2.28
NME3-206ENST00000564252 CDK5RAP2Q96SN8 1893 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 FCGRTP55899 365 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 PPP4CP60510 307 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 MTFR1Q15390 333 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 ADGRA1Q86SQ6 560 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 TLR7Q9NYK1 1049 aaKnown RBP29.27■■■□□ 2.28
NME3-206ENST00000564252 AGTPBP1Q9UPW5 1226 aa29.27■■■□□ 2.28
NME3-206ENST00000564252 LOC285556D6RIA3 1793 aa29.26■■■□□ 2.28
NME3-206ENST00000564252 ZBED9Q6R2W3 1325 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 BAG3O95817 575 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 GRK4P32298 578 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 CAP2P40123 477 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 ZAP70P43403 619 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 PRKCZQ05513 592 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 HERC5Q9UII4 1024 aaKnown RBP29.26■■■□□ 2.27
NME3-206ENST00000564252 FOCADQ5VW36 1801 aa29.26■■■□□ 2.27
NME3-206ENST00000564252 PLCG2P16885 1265 aa29.25■■■□□ 2.27
NME3-206ENST00000564252 TREML2Q5T2D2 321 aa29.25■■■□□ 2.27
NME3-206ENST00000564252 CEP85Q6P2H3 762 aa29.25■■■□□ 2.27
NME3-206ENST00000564252 EAF2Q96CJ1 260 aaPredicted RBP29.25■■■□□ 2.27
NME3-206ENST00000564252 PIH1D3Q9NQM4 214 aaKnown RBP29.25■■■□□ 2.27
NME3-206ENST00000564252 IGSF3O75054 1194 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 SPP2Q13103 211 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 PROCA1Q8NCQ7 364 aaPredicted RBP29.24■■■□□ 2.27
NME3-206ENST00000564252 ZNF280CQ8ND82 737 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 SMCR8Q8TEV9 937 aaPredicted RBP29.24■■■□□ 2.27
NME3-206ENST00000564252 TBC1D2Q9BYX2 928 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 CCDC8Q9H0W5 538 aaPredicted RBP29.24■■■□□ 2.27
NME3-206ENST00000564252 DHX36Q9H2U1 1008 aaKnown RBP29.24■■■□□ 2.27
NME3-206ENST00000564252 PI4KBQ9UBF8 816 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 GABRQQ9UN88 632 aa29.24■■■□□ 2.27
NME3-206ENST00000564252 TGFBRAP1Q8WUH2 860 aa29.23■■■□□ 2.27
NME3-206ENST00000564252 GCC1Q96CN9 775 aa29.23■■■□□ 2.27
NME3-206ENST00000564252 FLT1P17948 1338 aa29.22■■■□□ 2.27
NME3-206ENST00000564252 MAPKAPK5Q8IW41 473 aa29.22■■■□□ 2.27
NME3-206ENST00000564252 USP17L5A8MUK1 530 aa29.21■■■□□ 2.27
NME3-206ENST00000564252 PANK1Q8TE04 598 aa29.21■■■□□ 2.27
NME3-206ENST00000564252 SHISA4Q96DD7 197 aa29.21■■■□□ 2.27
NME3-206ENST00000564252 HMGCS2P54868 508 aa29.2■■■□□ 2.26
NME3-206ENST00000564252 METTL16Q86W50 562 aaKnown RBP29.2■■■□□ 2.26
NME3-206ENST00000564252 SLAIN1Q8ND83 568 aa29.2■■■□□ 2.26
NME3-206ENST00000564252 DNAJC18Q9H819 358 aa29.2■■■□□ 2.26
NME3-206ENST00000564252 PNMA3Q9UL41 463 aa29.2■■■□□ 2.26
NME3-206ENST00000564252 CCL5P13501 91 aa29.19■■■□□ 2.26
NME3-206ENST00000564252 SH3D19Q5HYK7 790 aa29.19■■■□□ 2.26
NME3-206ENST00000564252 ANKRD13CQ8N6S4 541 aa29.19■■■□□ 2.26
NME3-206ENST00000564252 FLT3LGP49771 235 aa29.18■■■□□ 2.26
NME3-206ENST00000564252 DYNLL1P63167 89 aaKnown RBP29.18■■■□□ 2.26
NME3-206ENST00000564252 BIN2Q9UBW5 565 aaPredicted RBP29.18■■■□□ 2.26
NME3-206ENST00000564252 PALD1Q9ULE6 856 aa29.18■■■□□ 2.26
NME3-206ENST00000564252 EXOC6BQ9Y2D4 811 aa29.18■■■□□ 2.26
NME3-206ENST00000564252 TNPO2O14787 897 aaKnown RBP29.17■■■□□ 2.26
NME3-206ENST00000564252 CYP7A1P22680 504 aa29.17■■■□□ 2.26
NME3-206ENST00000564252 UBXN2AP68543 259 aa29.17■■■□□ 2.26
NME3-206ENST00000564252 JAG1P78504 1218 aa29.17■■■□□ 2.26
NME3-206ENST00000564252 FAM110CQ1W6H9 321 aa29.17■■■□□ 2.26
NME3-206ENST00000564252 FOXP4Q8IVH2 680 aaPredicted RBP29.17■■■□□ 2.26
NME3-206ENST00000564252 AS3MTQ9HBK9 375 aa29.17■■■□□ 2.26
NME3-206ENST00000564252 ADCY3O60266 1144 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 IDH1O75874 414 aaKnown RBP29.16■■■□□ 2.26
NME3-206ENST00000564252 GJB1P08034 283 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 ERC1Q8IUD2 1116 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 NKX2-3Q8TAU0 364 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 WDR18Q9BV38 432 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 NDUFB9Q9Y6M9 179 aa29.16■■■□□ 2.26
NME3-206ENST00000564252 ASNSP08243 561 aa29.15■■■□□ 2.26
NME3-206ENST00000564252 GJA8P48165 433 aa29.15■■■□□ 2.26
NME3-206ENST00000564252 PABPC4Q13310 644 aaKnown RBP eCLIP29.15■■■□□ 2.26
NME3-206ENST00000564252 IRF5Q13568 498 aa29.15■■■□□ 2.26
NME3-206ENST00000564252 CRACR2BQ8N4Y2 399 aaPredicted RBP29.15■■■□□ 2.26
NME3-206ENST00000564252 RNF208Q9H0X6 261 aa29.15■■■□□ 2.26
NME3-206ENST00000564252 SAP30BPQ9UHR5 308 aaKnown RBP29.15■■■□□ 2.26
NME3-206ENST00000564252 GCLCP48506 637 aaPredicted RBP29.14■■■□□ 2.26
NME3-206ENST00000564252 SHROOM1Q2M3G4 852 aaPredicted RBP29.14■■■□□ 2.26
NME3-206ENST00000564252 AACSQ86V21 672 aa29.14■■■□□ 2.26
NME3-206ENST00000564252 ASCC2Q9H1I8 757 aaPredicted RBP29.14■■■□□ 2.26
NME3-206ENST00000564252 ANTXR1Q9H6X2 564 aa29.14■■■□□ 2.26
NME3-206ENST00000564252 DOCK3Q8IZD9 2030 aa29.14■■■□□ 2.26
NME3-206ENST00000564252 ELNP15502 786 aa29.13■■■□□ 2.25
NME3-206ENST00000564252 BACE1P56817 501 aa29.13■■■□□ 2.25
NME3-206ENST00000564252 MTMR2Q13614 643 aa29.13■■■□□ 2.25
NME3-206ENST00000564252 HABP4Q5JVS0 413 aaKnown RBP29.13■■■□□ 2.25
NME3-206ENST00000564252 PXYLP1Q8TE99 480 aa29.13■■■□□ 2.25
NME3-206ENST00000564252 CEP290O15078 2479 aa29.13■■■□□ 2.25
NME3-206ENST00000564252 MAGEB6Q8N7X4 407 aa29.12■■■□□ 2.25
NME3-206ENST00000564252 MIGA1Q8NAN2 632 aa29.12■■■□□ 2.25
NME3-206ENST00000564252 COA7Q96BR5 231 aa29.12■■■□□ 2.25
NME3-206ENST00000564252 TRIM34Q9BYJ4 488 aa29.12■■■□□ 2.25
NME3-206ENST00000564252 UNC93B1Q9H1C4 597 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms