RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 COBLO75128 1261 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 FANCCQ00597 558 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 SEPT6Q14141 434 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 INPP5AQ14642 412 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 CWF19L2Q2TBE0 894 aaKnown RBP4.93□□□□□ -1.62
CHD9-207ENST00000562806 PPM1JQ5JR12 505 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 ZNF746Q6NUN9 644 aaPredicted RBP4.93□□□□□ -1.62
CHD9-207ENST00000562806 MPRIPQ6WCQ1 1025 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 FAM196AQ6ZSG2 479 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 ZDHHC13Q8IUH4 622 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 GOLM1Q8NBJ4 401 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 SHKBP1Q8TBC3 707 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 SPATA32Q96LK8 384 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 MFSD14AQ96MC6 490 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 LRRC3Q9BY71 257 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 PIM2Q9P1W9 311 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 TLR6Q9Y2C9 796 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 FAM221AA4D161 298 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 WDR64B1ANS9 1081 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 RECKO95980 971 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 NEFMP07197 916 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 PTPN11Q06124 597 aaPredicted RBP4.92□□□□□ -1.62
CHD9-207ENST00000562806 ZMYM1Q5SVZ6 1142 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 SLC6A19Q695T7 634 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 FBXL6Q8N531 539 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 MKNK2Q9HBH9 465 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 C1GALT1Q9NS00 363 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 CSADQ9Y600 493 aa4.92□□□□□ -1.62
CHD9-207ENST00000562806 GREM1O60565 184 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 F13A1P00488 732 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 F13BP05160 661 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 PGRP06401 933 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 FOSL1P15407 271 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 LDLRAD1Q5T700 205 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 USP48Q86UV5 1035 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 KIAA0825Q8IV33 1275 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 ZNF654Q8IZM8 581 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 ZNF296Q8WUU4 475 aaPredicted RBP4.91□□□□□ -1.62
CHD9-207ENST00000562806 PSMG3-AS1Q96PY0 264 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 SPON2Q9BUD6 331 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 NT5C1AQ9BXI3 368 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 FOXQ1Q9C009 403 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 PRDM10Q9NQV6 1147 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 GTF2IRD1Q9UHL9 959 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 PRR36Q9H6K5 1346 aa4.91□□□□□ -1.62
CHD9-207ENST00000562806 PRR19A6NJB7 356 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 CYP26A1O43174 497 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 CST3P01034 146 aaPredicted RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 CYP7A1P22680 504 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 GRK4P32298 578 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 NTF4P34130 210 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 YARSP54577 528 aaKnown RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 COL9A2Q14055 689 aaPredicted RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 LRP8Q14114 963 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 TMEM201Q5SNT2 666 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 FBXL19Q6PCT2 694 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 BNC2Q6ZN30 1099 aaPredicted RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 REC114Q7Z4M0 266 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 MCATQ8IVS2 390 aaKnown RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 MRPL41Q8IXM3 137 aaKnown RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 REXO1Q8N1G1 1221 aaKnown RBP4.9□□□□□ -1.63
CHD9-207ENST00000562806 GATA6Q92908 595 aa4.9□□□□□ -1.63
CHD9-207ENST00000562806 E9PSI1 815 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 IGF2BP3O00425 579 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHD9-207ENST00000562806 FAM87AP0C7U9 286 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 IMPDH2P12268 514 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 PLCG1P19174 1290 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 GARTP22102 1010 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 ITGB7P26010 798 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 ZNF165P49910 485 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 FAM160A1Q05DH4 1040 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 APOBRQ0VD83 1088 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 LRRFIP1Q32MZ4 808 aaKnown RBP4.89□□□□□ -1.63
CHD9-207ENST00000562806 ARHGAP27Q6ZUM4 889 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 ARMCX6Q7L4S7 300 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 MISP3Q96FF7 219 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 DUSP23Q9BVJ7 150 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 COPRSQ9NQ92 184 aa4.89□□□□□ -1.63
CHD9-207ENST00000562806 KIAA1522Q9P206 1035 aaPredicted RBP4.89□□□□□ -1.63
CHD9-207ENST00000562806 SCO2A0A1W2PP80 73 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 FAM170BA6NMN3 283 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 DYNC1LI2O43237 492 aaPredicted RBP4.88□□□□□ -1.63
CHD9-207ENST00000562806 ATE1O95260 518 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 ADMP35318 185 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 ETV3P41162 512 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 CD97P48960 835 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 CDK5R2Q13319 367 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 SLBPQ14493 270 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD9-207ENST00000562806 ARTNQ5T4W7 220 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 ZNF765Q7L2R6 523 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 STK11IPQ8N1F8 1099 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 NKD1Q969G9 470 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 LGR6Q9HBX8 967 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 DDX41Q9UJV9 622 aaKnown RBP4.88□□□□□ -1.63
CHD9-207ENST00000562806 MAPK8IP1Q9UQF2 711 aa4.88□□□□□ -1.63
CHD9-207ENST00000562806 UNCXA6NJT0 531 aa4.87□□□□□ -1.63
CHD9-207ENST00000562806 KIAA1324LA8MWY0 1029 aaPredicted RBP4.87□□□□□ -1.63
CHD9-207ENST00000562806 F6X3S4 739 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms