RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
BBS4-205ENST00000562219 MYH1P12882 1939 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
BBS4-205ENST00000562219 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
BBS4-205ENST00000562219 GSTO1P78417 241 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 TFCP2Q12800 502 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 MTX1Q13505 466 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
BBS4-205ENST00000562219 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 DEFB118Q96PH6 123 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
BBS4-205ENST00000562219 OSBPL5Q9H0X9 879 aaPredicted RBP12.69□□□□□ -0.38
BBS4-205ENST00000562219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
BBS4-205ENST00000562219 FAM196BA6NMK8 535 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 EVI5O60447 810 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
BBS4-205ENST00000562219 GNAI3P08754 354 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
BBS4-205ENST00000562219 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 NSUN4Q96CB9 384 aaKnown RBP12.68□□□□□ -0.38
BBS4-205ENST00000562219 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
BBS4-205ENST00000562219 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 LDHCP07864 332 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
BBS4-205ENST00000562219 HMGCS2P54868 508 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 SPP2Q13103 211 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.38
BBS4-205ENST00000562219 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 ARHGAP45Q92619 1136 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 NEUROD6Q96NK8 337 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 LAMA3Q16787 3333 aa12.67□□□□□ -0.38
BBS4-205ENST00000562219 HMGCRP04035 888 aa12.66□□□□□ -0.38
BBS4-205ENST00000562219 CAP2P40123 477 aa12.66□□□□□ -0.38
BBS4-205ENST00000562219 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
BBS4-205ENST00000562219 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.38
BBS4-205ENST00000562219 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
BBS4-205ENST00000562219 HERC5Q9UII4 1024 aaKnown RBP12.66□□□□□ -0.38
BBS4-205ENST00000562219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
BBS4-205ENST00000562219 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
BBS4-205ENST00000562219 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
BBS4-205ENST00000562219 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
BBS4-205ENST00000562219 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
BBS4-205ENST00000562219 PAWRQ96IZ0 340 aaKnown RBP12.65□□□□□ -0.38
BBS4-205ENST00000562219 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
BBS4-205ENST00000562219 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
BBS4-205ENST00000562219 AS3MTQ9HBK9 375 aa12.65□□□□□ -0.38
BBS4-205ENST00000562219 COL6A3P12111 3177 aa12.65□□□□□ -0.39
BBS4-205ENST00000562219 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
BBS4-205ENST00000562219 MCAMP43121 646 aa12.64□□□□□ -0.39
BBS4-205ENST00000562219 RRP1BQ14684 758 aaKnown RBP12.64□□□□□ -0.39
BBS4-205ENST00000562219 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
BBS4-205ENST00000562219 DIS3LQ8TF46 1054 aaKnown RBP12.64□□□□□ -0.39
BBS4-205ENST00000562219 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
BBS4-205ENST00000562219 MYH8P13535 1937 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 GNAI2P04899 355 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 ASNSP08243 561 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 PLCG2P16885 1265 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 MTMR2Q13614 643 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
BBS4-205ENST00000562219 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
BBS4-205ENST00000562219 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
BBS4-205ENST00000562219 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 NAV1Q8NEY1 1877 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 BAG3O95817 575 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 TRIM27P14373 513 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 BACE1P56817 501 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
BBS4-205ENST00000562219 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
BBS4-205ENST00000562219 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
BBS4-205ENST00000562219 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 HMX1Q9NP08 348 aaPredicted RBP12.62□□□□□ -0.39
BBS4-205ENST00000562219 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
BBS4-205ENST00000562219 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
BBS4-205ENST00000562219 SOX1O00570 391 aaPredicted RBP12.61□□□□□ -0.39
BBS4-205ENST00000562219 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
BBS4-205ENST00000562219 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
BBS4-205ENST00000562219 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 SOCS4Q8WXH5 440 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 TRIB2Q92519 343 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 STAP2Q9UGK3 403 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 FLT1P17948 1338 aa12.61□□□□□ -0.39
BBS4-205ENST00000562219 PPP4CP60510 307 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 HERVK_113P62684 666 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 TRIM32Q13049 653 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 MAP3K21Q5TCX8 1036 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
BBS4-205ENST00000562219 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
BBS4-205ENST00000562219 GPRC5AQ8NFJ5 357 aa12.6□□□□□ -0.39
BBS4-205ENST00000562219 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms