RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 DIS3LQ8TF46 1054 aaKnown RBP23.09■■□□□ 1.29
TRIP4-211ENST00000560920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIP4-211ENST00000560920 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
TRIP4-211ENST00000560920 HDAC5Q9UQL6 1122 aa23.09■■□□□ 1.29
TRIP4-211ENST00000560920 LAMA3Q16787 3333 aa23.09■■□□□ 1.29
TRIP4-211ENST00000560920 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
TRIP4-211ENST00000560920 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.08■■□□□ 1.29
TRIP4-211ENST00000560920 OSBPL5Q9H0X9 879 aaPredicted RBP23.08■■□□□ 1.29
TRIP4-211ENST00000560920 GJD2Q9UKL4 321 aa23.08■■□□□ 1.29
TRIP4-211ENST00000560920 ALPK3Q96L96 1907 aa23.08■■□□□ 1.28
TRIP4-211ENST00000560920 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
TRIP4-211ENST00000560920 NECAB2Q7Z6G3 386 aa23.07■■□□□ 1.28
TRIP4-211ENST00000560920 LRCH3Q96II8 777 aa23.07■■□□□ 1.28
TRIP4-211ENST00000560920 API5Q9BZZ5 524 aaKnown RBP23.07■■□□□ 1.28
TRIP4-211ENST00000560920 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
TRIP4-211ENST00000560920 AKAP2Q9Y2D5 859 aa23.07■■□□□ 1.28
TRIP4-211ENST00000560920 GCLCP48506 637 aaPredicted RBP23.06■■□□□ 1.28
TRIP4-211ENST00000560920 HMGCS2P54868 508 aa23.06■■□□□ 1.28
TRIP4-211ENST00000560920 TBC1D9Q6ZT07 1266 aa23.06■■□□□ 1.28
TRIP4-211ENST00000560920 NSUN4Q96CB9 384 aaKnown RBP23.06■■□□□ 1.28
TRIP4-211ENST00000560920 CAP2P40123 477 aa23.05■■□□□ 1.28
TRIP4-211ENST00000560920 TRIM32Q13049 653 aa23.05■■□□□ 1.28
TRIP4-211ENST00000560920 PI16Q6UXB8 463 aa23.05■■□□□ 1.28
TRIP4-211ENST00000560920 ASCC2Q9H1I8 757 aaPredicted RBP23.05■■□□□ 1.28
TRIP4-211ENST00000560920 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 SRGAP3O43295 1099 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 MAP4K4O95819 1239 aaPredicted RBP23.04■■□□□ 1.28
TRIP4-211ENST00000560920 HMGCRP04035 888 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 LDHCP07864 332 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 MNX1P50219 401 aaPredicted RBP23.04■■□□□ 1.28
TRIP4-211ENST00000560920 SH3D19Q5HYK7 790 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 ANKLE1Q8NAG6 615 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 SPATA5Q8NB90 893 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 SLC17A8Q8NDX2 589 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 NEUROD6Q96NK8 337 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 GDF15Q99988 308 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 TBC1D2Q9BYX2 928 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 COL6A3P12111 3177 aa23.04■■□□□ 1.28
TRIP4-211ENST00000560920 COL2A1P02458 1487 aaPredicted RBP23.04■■□□□ 1.28
TRIP4-211ENST00000560920 USP17L5A8MUK1 530 aa23.03■■□□□ 1.28
TRIP4-211ENST00000560920 GSTO1P78417 241 aa23.03■■□□□ 1.28
TRIP4-211ENST00000560920 PABPC4Q13310 644 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRIP4-211ENST00000560920 RPTORQ8N122 1335 aa23.03■■□□□ 1.28
TRIP4-211ENST00000560920 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
TRIP4-211ENST00000560920 BMP8BP34820 402 aa23.02■■□□□ 1.28
TRIP4-211ENST00000560920 MTX1Q13505 466 aa23.02■■□□□ 1.28
TRIP4-211ENST00000560920 HMX1Q9NP08 348 aaPredicted RBP23.02■■□□□ 1.28
TRIP4-211ENST00000560920 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
TRIP4-211ENST00000560920 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
TRIP4-211ENST00000560920 C7orf61Q8IZ16 206 aa23.01■■□□□ 1.27
TRIP4-211ENST00000560920 RAI14Q9P0K7 980 aa23.01■■□□□ 1.27
TRIP4-211ENST00000560920 ZMYND8Q9ULU4 1186 aaPredicted RBP23.01■■□□□ 1.27
TRIP4-211ENST00000560920 PLXNB2O15031 1838 aa23.01■■□□□ 1.27
TRIP4-211ENST00000560920 DLL1O00548 723 aa23■■□□□ 1.27
TRIP4-211ENST00000560920 ARID4AP29374 1257 aaPredicted RBP23■■□□□ 1.27
TRIP4-211ENST00000560920 TEX11Q8IYF3 940 aa23■■□□□ 1.27
TRIP4-211ENST00000560920 NBPF3Q9H094 633 aa23■■□□□ 1.27
TRIP4-211ENST00000560920 HERC5Q9UII4 1024 aaKnown RBP23■■□□□ 1.27
TRIP4-211ENST00000560920 PEX10O60683 326 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 GNAI3P08754 354 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 JAG1P78504 1218 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 GORABQ5T7V8 394 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
TRIP4-211ENST00000560920 TRIB2Q92519 343 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 WDR18Q9BV38 432 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 AS3MTQ9HBK9 375 aa22.99■■□□□ 1.27
TRIP4-211ENST00000560920 MCAMP43121 646 aa22.98■■□□□ 1.27
TRIP4-211ENST00000560920 P2RX7Q99572 595 aaKnown RBP22.98■■□□□ 1.27
TRIP4-211ENST00000560920 PI4KBQ9UBF8 816 aa22.98■■□□□ 1.27
TRIP4-211ENST00000560920 OGDHLQ9ULD0 1010 aa22.98■■□□□ 1.27
TRIP4-211ENST00000560920 CYP2B6P20813 491 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 HOXA7P31268 230 aaPredicted RBP22.97■■□□□ 1.27
TRIP4-211ENST00000560920 RARSP54136 660 aaKnown RBP22.97■■□□□ 1.27
TRIP4-211ENST00000560920 BACE1P56817 501 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 MTMR2Q13614 643 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 MAP3K21Q5TCX8 1036 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 ARHGAP45Q92619 1136 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 C11orf49Q9H6J7 331 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 TXNRD2Q9NNW7 524 aa22.97■■□□□ 1.27
TRIP4-211ENST00000560920 SYN1P17600 705 aa22.96■■□□□ 1.27
TRIP4-211ENST00000560920 LRP2BPQ9P2M1 347 aa22.96■■□□□ 1.27
TRIP4-211ENST00000560920 SIPA1L1O43166 1804 aa22.96■■□□□ 1.27
TRIP4-211ENST00000560920 IRX3P78415 501 aaPredicted RBP22.95■■□□□ 1.26
TRIP4-211ENST00000560920 SHROOM1Q2M3G4 852 aaPredicted RBP22.95■■□□□ 1.26
TRIP4-211ENST00000560920 DDX60LQ5H9U9 1706 aaKnown RBP22.95■■□□□ 1.26
TRIP4-211ENST00000560920 DHX36Q9H2U1 1008 aaKnown RBP22.95■■□□□ 1.26
TRIP4-211ENST00000560920 DNAJC18Q9H819 358 aa22.95■■□□□ 1.26
TRIP4-211ENST00000560920 A0A0C4DFX4 3053 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 PNMA6EA0A0J9YXQ4 647 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 ASNSP08243 561 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 UQCRFS1P1P0C7P4 283 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 XRCC5P13010 732 aaKnown RBP22.94■■□□□ 1.26
TRIP4-211ENST00000560920 HERVK_113P62684 666 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 GPR153Q6NV75 609 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 METTL16Q86W50 562 aaKnown RBP22.94■■□□□ 1.26
TRIP4-211ENST00000560920 GPRC5AQ8NFJ5 357 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 NUDT12Q9BQG2 462 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 AATFQ9NY61 560 aaKnown RBP eCLIP22.94■■□□□ 1.26
TRIP4-211ENST00000560920 TMOD4Q9NZQ9 345 aa22.94■■□□□ 1.26
TRIP4-211ENST00000560920 RBPJLQ9UBG7 517 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms