RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 SSH3Q8TE77 659 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 ZNF70Q9UC06 446 aaPredicted RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 ITSN1Q15811 1721 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 GH2P01242 217 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 DPF3Q92784 378 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 PDGFDQ9GZP0 370 aaPredicted RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 CEP131Q9UPN4 1083 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 GTF2A2P52657 109 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
TRPM1-212ENST00000560801 GLG1Q92896 1179 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 PSMD1Q99460 953 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 B4E1Z4 1266 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 MMP14P50281 582 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
TRPM1-212ENST00000560801 PTPN12Q05209 780 aaKnown RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 BMS1Q14692 1282 aaKnown RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 ARHGEF16Q5VV41 709 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 DYNLL1P63167 89 aaKnown RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 PPARAQ07869 468 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 BRF1Q92994 677 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 FAM84BQ96KN1 310 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 EFCC1Q9HA90 598 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 CCDC129Q6ZRS4 1044 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
TRPM1-212ENST00000560801 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
TRPM1-212ENST00000560801 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 DPF2Q92785 391 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 MXD3Q9BW11 206 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 APLP1P51693 650 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 TCP11L1Q9NUJ3 509 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 MANSC4A6NHS7 340 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 RGL2O15211 777 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 BECN2A8MW95 431 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 FCGRTP55899 365 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 MTIF3Q9H2K0 278 aaKnown RBP11.11□□□□□ -0.63
TRPM1-212ENST00000560801 TRIM17Q9Y577 477 aa11.11□□□□□ -0.63
TRPM1-212ENST00000560801 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
TRPM1-212ENST00000560801 UBE3CQ15386 1083 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 EDC3Q96F86 508 aaKnown RBP11.1□□□□□ -0.63
TRPM1-212ENST00000560801 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
TRPM1-212ENST00000560801 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 HMGCS2P54868 508 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 BICD1Q96G01 975 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
TRPM1-212ENST00000560801 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 CCDC39Q9UFE4 941 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
TRPM1-212ENST00000560801 PTMSP20962 102 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TM4SF1P30408 202 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 POLLQ9UGP5 575 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 IFNL3Q8IZI9 196 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TPM1P09493 284 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 ME1P48163 572 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 OFD1O75665 1012 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TTLL1O95922 423 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
TRPM1-212ENST00000560801 BMP3P12645 472 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TAF12Q16514 161 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-212ENST00000560801 RGMBQ6NW40 437 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 FAM151AQ8WW52 585 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
TRPM1-212ENST00000560801 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
TRPM1-212ENST00000560801 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
TRPM1-212ENST00000560801 NUCB1Q02818 461 aa11.08□□□□□ -0.64
TRPM1-212ENST00000560801 ERO1BQ86YB8 467 aa11.08□□□□□ -0.64
TRPM1-212ENST00000560801 ADM5C9JUS6 153 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms