RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 GAPVD1Q14C86 1478 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 ABCA5Q8WWZ7 1642 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 PBRM1Q86U86 1689 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 ID3Q02535 119 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 MAP7Q14244 749 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 OSBPL1AQ9BXW6 950 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 GRIN2BQ13224 1484 aa6.46□□□□□ -1.37
TMOD3-207ENST00000560549 GIPC1O14908 333 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 HCLS1P14317 486 aaPredicted RBP6.46□□□□□ -1.38
TMOD3-207ENST00000560549 NTF4P34130 210 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 PTPN11Q06124 597 aaPredicted RBP6.46□□□□□ -1.38
TMOD3-207ENST00000560549 TTLL4Q14679 1199 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 COL19A1Q14993 1142 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 EAPPQ56P03 285 aaPredicted RBP6.46□□□□□ -1.38
TMOD3-207ENST00000560549 UBE3DQ7Z6J8 389 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 GIPC2Q8TF65 315 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 CBX8Q9HC52 389 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 SNAPC4Q5SXM2 1469 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 MAGI1Q96QZ7 1491 aaPredicted RBP6.46□□□□□ -1.38
TMOD3-207ENST00000560549 ARHGAP35Q9NRY4 1499 aa6.46□□□□□ -1.38
TMOD3-207ENST00000560549 CHD1O14646 1710 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 ZC3H12AQ5D1E8 599 aaKnown RBP6.45□□□□□ -1.38
TMOD3-207ENST00000560549 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 PCNX4Q63HM2 1172 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 BCL2L13Q9BXK5 485 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 PARP2Q9UGN5 583 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 AK5Q9Y6K8 562 aa6.45□□□□□ -1.38
TMOD3-207ENST00000560549 WNT11O96014 354 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 CTSHP09668 335 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 CDK5R2Q13319 367 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 ZNF765Q7L2R6 523 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 FBXO41Q8TF61 875 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
TMOD3-207ENST00000560549 CSADQ9Y600 493 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 U3KQE9 123 aa6.44□□□□□ -1.38
TMOD3-207ENST00000560549 EIF4BP23588 611 aaKnown RBP6.43□□□□□ -1.38
TMOD3-207ENST00000560549 CDK8P49336 464 aa6.43□□□□□ -1.38
TMOD3-207ENST00000560549 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
TMOD3-207ENST00000560549 ISL2Q96A47 359 aa6.43□□□□□ -1.38
TMOD3-207ENST00000560549 CEP44Q9C0F1 390 aa6.43□□□□□ -1.38
TMOD3-207ENST00000560549 ATXN3LQ9H3M9 355 aa6.43□□□□□ -1.38
TMOD3-207ENST00000560549 SYNJ2O15056 1496 aa6.43□□□□□ -1.38
TMOD3-207ENST00000560549 DCDC2CA8MYV0 355 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 SLFN14P0C7P3 912 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 ZEB1P37275 1124 aaPredicted RBP6.42□□□□□ -1.38
TMOD3-207ENST00000560549 DAB2P98082 770 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 RING1Q06587 406 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 PPM1JQ5JR12 505 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
TMOD3-207ENST00000560549 CCDC39Q9UFE4 941 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 ADGRE2Q9UHX3 823 aa6.42□□□□□ -1.38
TMOD3-207ENST00000560549 CYP26A1O43174 497 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 TRIM37O94972 964 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 IRAK1P51617 712 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 INPP5AQ14642 412 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 OGFOD3Q6PK18 319 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 VSIG10LQ86VR7 867 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 ACSBG1Q96GR2 724 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 EMILIN2Q9BXX0 1053 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 LEFTY1O75610 366 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 ERVK-24P63145 666 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 C12orf40Q86WS4 652 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 FRMD6Q96NE9 622 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 FMNL2Q96PY5 1086 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 BSDC1Q9NW68 430 aaPredicted RBP6.41□□□□□ -1.38
TMOD3-207ENST00000560549 PCDHB5Q9Y5E4 795 aa6.41□□□□□ -1.38
TMOD3-207ENST00000560549 ADAMTS12P58397 1594 aa6.4□□□□□ -1.38
TMOD3-207ENST00000560549 DUSP27Q5VZP5 1158 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 TTBK2Q6IQ55 1244 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 CBLL1Q75N03 491 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 SV2BQ7L1I2 683 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 RNF214Q8ND24 703 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 ZC3H7BQ9UGR2 993 aaKnown RBP6.4□□□□□ -1.39
TMOD3-207ENST00000560549 LMTK3Q96Q04 1460 aa6.4□□□□□ -1.39
TMOD3-207ENST00000560549 FHAD1B1AJZ9 1412 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 RNGTTO60942 597 aaKnown RBP6.39□□□□□ -1.39
TMOD3-207ENST00000560549 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
TMOD3-207ENST00000560549 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
TMOD3-207ENST00000560549 MAP3K11Q16584 847 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 TMC4Q7Z404 712 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 MRRFQ96E11 262 aaKnown RBP6.39□□□□□ -1.39
TMOD3-207ENST00000560549 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 CYP8B1Q9UNU6 501 aa6.39□□□□□ -1.39
TMOD3-207ENST00000560549 GRIN2AQ12879 1464 aa6.38□□□□□ -1.39
TMOD3-207ENST00000560549 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms