RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 CCDC158Q5M9N0 1113 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
SMAD3-214ENST00000560402 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 PROCA1Q8NCQ7 364 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-214ENST00000560402 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-214ENST00000560402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMAD3-214ENST00000560402 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
SMAD3-214ENST00000560402 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
SMAD3-214ENST00000560402 BAG3O95817 575 aa16.62■□□□□ 0.25
SMAD3-214ENST00000560402 UBXN2AP68543 259 aa16.62■□□□□ 0.25
SMAD3-214ENST00000560402 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
SMAD3-214ENST00000560402 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
SMAD3-214ENST00000560402 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
SMAD3-214ENST00000560402 TRIM75PA6NK02 468 aa16.61■□□□□ 0.25
SMAD3-214ENST00000560402 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
SMAD3-214ENST00000560402 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
SMAD3-214ENST00000560402 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-214ENST00000560402 TBC1D9Q6ZT07 1266 aa16.61■□□□□ 0.25
SMAD3-214ENST00000560402 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
SMAD3-214ENST00000560402 CAP2P40123 477 aa16.6■□□□□ 0.25
SMAD3-214ENST00000560402 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-214ENST00000560402 PRKCZQ05513 592 aa16.6■□□□□ 0.25
SMAD3-214ENST00000560402 PABPC4Q13310 644 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD3-214ENST00000560402 FAM110CQ1W6H9 321 aa16.6■□□□□ 0.25
SMAD3-214ENST00000560402 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
SMAD3-214ENST00000560402 NOP58Q9Y2X3 529 aaKnown RBP16.6■□□□□ 0.25
SMAD3-214ENST00000560402 MYH1P12882 1939 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-214ENST00000560402 GJB1P08034 283 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 CAPN2P17655 700 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 IRF5Q13568 498 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 SHISA4Q96DD7 197 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 PI4KBQ9UBF8 816 aa16.59■□□□□ 0.25
SMAD3-214ENST00000560402 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 MYCP01106 439 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 GJA8P48165 433 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 PPP4CP60510 307 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 MTFR1Q15390 333 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 HABP4Q5JVS0 413 aaKnown RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 PXYLP1Q8TE99 480 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
SMAD3-214ENST00000560402 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-214ENST00000560402 DOCK3Q8IZD9 2030 aa16.57■□□□□ 0.24
SMAD3-214ENST00000560402 FLT1P17948 1338 aa16.57■□□□□ 0.24
SMAD3-214ENST00000560402 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
SMAD3-214ENST00000560402 ASNSP08243 561 aa16.57■□□□□ 0.24
SMAD3-214ENST00000560402 CCL5P13501 91 aa16.57■□□□□ 0.24
SMAD3-214ENST00000560402 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-214ENST00000560402 SH3D19Q5HYK7 790 aa16.57■□□□□ 0.24
SMAD3-214ENST00000560402 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-214ENST00000560402 BIN2Q9UBW5 565 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-214ENST00000560402 ADCY3O60266 1144 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-214ENST00000560402 SPP2Q13103 211 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 TREML2Q5T2D2 321 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 COA7Q96BR5 231 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
SMAD3-214ENST00000560402 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
SMAD3-214ENST00000560402 CEP290O15078 2479 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-214ENST00000560402 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 ZAP70P43403 619 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 FLT3LGP49771 235 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 HMGCS2P54868 508 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
SMAD3-214ENST00000560402 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 WDR18Q9BV38 432 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 RNF208Q9H0X6 261 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
SMAD3-214ENST00000560402 GABRQQ9UN88 632 aa16.55■□□□□ 0.24
SMAD3-214ENST00000560402 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
SMAD3-214ENST00000560402 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-214ENST00000560402 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
SMAD3-214ENST00000560402 CRACR2BQ8N4Y2 399 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-214ENST00000560402 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
SMAD3-214ENST00000560402 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
SMAD3-214ENST00000560402 RLBP1P12271 317 aa16.53■□□□□ 0.24
SMAD3-214ENST00000560402 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
SMAD3-214ENST00000560402 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
SMAD3-214ENST00000560402 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
SMAD3-214ENST00000560402 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
SMAD3-214ENST00000560402 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
SMAD3-214ENST00000560402 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-214ENST00000560402 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms