RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 RIOK1Q9BRS2 568 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 KCNH4Q9UQ05 1017 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 ZHX2Q9Y6X8 837 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 MYH1P12882 1939 aa14.15□□□□□ -0.14
RABGGTA-216ENST00000560243 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.15
RABGGTA-216ENST00000560243 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 CTNND1O60716 968 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 FKTNO75072 461 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 CAP1Q01518 475 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 CTU1Q7Z7A3 348 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 OTUD7AQ8TE49 926 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 PICK1Q9NRD5 415 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 PI4KBQ9UBF8 816 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 HTTP42858 3142 aa14.14□□□□□ -0.15
RABGGTA-216ENST00000560243 PTPRFP10586 1907 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 MYH7P12883 1935 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 MAGEB6P1A0A0J9YX57 407 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 USP5P45974 858 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 JAG1P78504 1218 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 TAF1CQ15572 869 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 SHROOM1Q2M3G4 852 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 AFG3L2Q9Y4W6 797 aa14.13□□□□□ -0.15
RABGGTA-216ENST00000560243 ADD2P35612 726 aa14.12□□□□□ -0.15
RABGGTA-216ENST00000560243 CAP2P40123 477 aa14.12□□□□□ -0.15
RABGGTA-216ENST00000560243 EVX2Q03828 476 aa14.12□□□□□ -0.15
RABGGTA-216ENST00000560243 LCORLQ8N3X6 602 aa14.12□□□□□ -0.15
RABGGTA-216ENST00000560243 HERC5Q9UII4 1024 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-216ENST00000560243 TRIM75PA6NK02 468 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 CCDC85CA6NKD9 419 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 CXCL11O14625 94 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 DDX60LQ5H9U9 1706 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 GPAT2Q6NUI2 795 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 TMED8Q6PL24 325 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 NAV1Q8NEY1 1877 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 EXOC6Q8TAG9 804 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 ARMT1Q9H993 441 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 ZFYVE28Q9HCC9 887 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
RABGGTA-216ENST00000560243 A0A0G2JLL6 359 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 PDHXO00330 501 aa14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 PRKAB2O43741 272 aa14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 PRRT2Q7Z6L0 340 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 FOXP4Q8IVH2 680 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 CRACR2BQ8N4Y2 399 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 SDR42E1Q8WUS8 393 aa14.1□□□□□ -0.15
RABGGTA-216ENST00000560243 MBD4O95243 580 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 GDF11O95390 407 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 PLCD1P51178 756 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 SP3Q02447 781 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 SPP2Q13103 211 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 HDAC1Q13547 482 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 CRNKL1Q9BZJ0 848 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-216ENST00000560243 CENPFP49454 3210 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 TLR2O60603 784 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 CYP2C8P10632 490 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 CYP2D6P10635 497 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 UBE3CQ15386 1083 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 ANKRD45Q5TZF3 282 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 OTOP1Q7RTM1 612 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 PI4K2BQ8TCG2 481 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 CPA4Q9UI42 421 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 TRIM17Q9Y577 477 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.16
RABGGTA-216ENST00000560243 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 SMIM22K7EJ46 135 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 TREML2Q5T2D2 321 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 KBTBD3Q8NAB2 608 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 ZNF280CQ8ND82 737 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 ERO1AQ96HE7 468 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 ARHGAP39Q9C0H5 1083 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 PUS7LQ9H0K6 701 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 MCM9Q9NXL9 1143 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 SERPINB13Q9UIV8 391 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 HPS5Q9UPZ3 1129 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 SALL3Q9BXA9 1300 aa14.07□□□□□ -0.16
RABGGTA-216ENST00000560243 IGHDP01880 384 aa14.06□□□□□ -0.16
RABGGTA-216ENST00000560243 POLR3DP05423 398 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-216ENST00000560243 HMGCS2P54868 508 aa14.06□□□□□ -0.16
RABGGTA-216ENST00000560243 PKN2Q16513 984 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-216ENST00000560243 TATDN1Q6P1N9 297 aa14.06□□□□□ -0.16
RABGGTA-216ENST00000560243 C17orf99Q6UX52 265 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms