RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 HDAC5Q9UQL6 1122 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
CLPX-206ENST00000560166 CD2APQ9Y5K6 639 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 DOT1LQ8TEK3 1739 aa7.77□□□□□ -1.17
CLPX-206ENST00000560166 VIRMAQ69YN4 1812 aaKnown RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 PALLDQ8WX93 1383 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 KAT6BQ8WYB5 2073 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 ESPNB1AK53 854 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 GNB5O14775 395 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 LZTS3O60299 673 aaPredicted RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 ALDH1L1O75891 902 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 GNAI3P08754 354 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 POU4F2Q12837 409 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 HDAC1Q13547 482 aaPredicted RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 DOC2BQ14184 412 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 MAP7D1Q3KQU3 841 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 WDR44Q5JSH3 913 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 COL23A1Q86Y22 540 aaPredicted RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 ZNF594Q96JF6 807 aaPredicted RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
CLPX-206ENST00000560166 TNNQ9UQP3 1299 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 USP16Q9Y5T5 823 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 CACNA1FO60840 1977 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 KDM2BQ8NHM5 1336 aa7.76□□□□□ -1.17
CLPX-206ENST00000560166 TUBGCP6Q96RT7 1819 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 COL24A1Q17RW2 1714 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 QSER1Q2KHR3 1735 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 LOC102724428A0A0B4J2F2 783 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 PRAMEF22A3QJZ6 481 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 CYP19A1P11511 503 aaPredicted RBP7.75□□□□□ -1.17
CLPX-206ENST00000560166 SIK1P57059 783 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 PROSER3Q2NL68 480 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 LINS1Q8NG48 757 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 PLBD2Q8NHP8 589 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 SRCIN1Q9C0H9 1055 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 RWDD1Q9H446 243 aaPredicted RBP7.75□□□□□ -1.17
CLPX-206ENST00000560166 PHAXQ9H814 394 aaKnown RBP7.75□□□□□ -1.17
CLPX-206ENST00000560166 CCNL1Q9UK58 526 aaPredicted RBP7.75□□□□□ -1.17
CLPX-206ENST00000560166 C5P01031 1676 aa7.75□□□□□ -1.17
CLPX-206ENST00000560166 N4BP2Q86UW6 1770 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 COL15A1P39059 1388 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 PI4KAP2A4QPH2 592 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 F11P03951 625 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 SSFA2P28290 1259 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 IL6STP40189 918 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 RAB15P59190 212 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 CLDN10P78369 228 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 NEXNQ0ZGT2 675 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 DPYDQ12882 1025 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 FOXD4L6Q3SYB3 417 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 BEND3Q5T5X7 828 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 NBPF10Q6P3W6 841 aaKnown RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 FOXD4L3Q6VB84 417 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 DNAJC10Q8IXB1 793 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 RPAP2Q8IXW5 612 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 NBPF15Q8N660 670 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 PI4KAP1Q8N8J0 262 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 CCDC85AQ96PX6 553 aaPredicted RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 DNAAF2Q9NVR5 837 aaKnown RBP7.74□□□□□ -1.17
CLPX-206ENST00000560166 DOLKQ9UPQ8 538 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 UTYO14607 1347 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 CNTNAP4Q9C0A0 1308 aa7.74□□□□□ -1.17
CLPX-206ENST00000560166 ITGB4P16144 1822 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 F6X3S4 739 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 THBS1P07996 1170 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 TRIM28Q13263 835 aaKnown RBP7.73□□□□□ -1.17
CLPX-206ENST00000560166 SLC4A10Q6U841 1118 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 COPS6Q7L5N1 327 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 SLC4A9Q96Q91 983 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
CLPX-206ENST00000560166 CCDC87Q9NVE4 849 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 MAP3K2Q9Y2U5 619 aa7.73□□□□□ -1.17
CLPX-206ENST00000560166 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 ERVV-1B6SEH8 477 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 HMMRO75330 724 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 A1BGP04217 495 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 GNAI2P04899 355 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 ATP1A2P50993 1020 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 FSTL1Q12841 308 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 HSP90AB3PQ58FF7 597 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 ARTNQ5T4W7 220 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 ARHGAP27Q6ZUM4 889 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 CLP1Q92989 425 aaKnown RBP7.72□□□□□ -1.17
CLPX-206ENST00000560166 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
CLPX-206ENST00000560166 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 TJP1Q07157 1748 aa7.72□□□□□ -1.17
CLPX-206ENST00000560166 A0A087WZG4 1122 aa7.71□□□□□ -1.18
CLPX-206ENST00000560166 SCO2A0A1W2PP80 73 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms