RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 NLRP2Q9NX02 1062 aa8.36□□□□□ -1.07
CRNDE-208ENST00000560029 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
CRNDE-208ENST00000560029 PCOLCE2Q9UKZ9 415 aa8.36□□□□□ -1.07
CRNDE-208ENST00000560029 FGD1P98174 961 aa8.35□□□□□ -1.07
CRNDE-208ENST00000560029 SLC23A3Q6PIS1 610 aa8.35□□□□□ -1.07
CRNDE-208ENST00000560029 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
CRNDE-208ENST00000560029 ISL2Q96A47 359 aa8.35□□□□□ -1.07
CRNDE-208ENST00000560029 LIN37Q96GY3 246 aaPredicted RBP8.35□□□□□ -1.07
CRNDE-208ENST00000560029 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
CRNDE-208ENST00000560029 XPCQ01831 940 aaPredicted RBP8.34□□□□□ -1.07
CRNDE-208ENST00000560029 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
CRNDE-208ENST00000560029 KCNMB1Q16558 191 aa8.34□□□□□ -1.07
CRNDE-208ENST00000560029 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
CRNDE-208ENST00000560029 IKZF1Q13422 519 aa8.33□□□□□ -1.08
CRNDE-208ENST00000560029 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
CRNDE-208ENST00000560029 FYB2Q5VWT5 728 aa8.33□□□□□ -1.08
CRNDE-208ENST00000560029 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
CRNDE-208ENST00000560029 MKNK2Q9HBH9 465 aa8.33□□□□□ -1.08
CRNDE-208ENST00000560029 CFPP27918 469 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 GNA15P30679 374 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 ZP2Q05996 745 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 PSMD2Q13200 908 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 GRM2Q14416 872 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 CILP2Q8IUL8 1156 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 KRTAP4-11Q9BYQ6 195 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 GPN3Q9UHW5 284 aaPredicted RBP8.32□□□□□ -1.08
CRNDE-208ENST00000560029 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
CRNDE-208ENST00000560029 RAP1GAPP47736 663 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 DAB2P98082 770 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
CRNDE-208ENST00000560029 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 TNKS2Q9H2K2 1166 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 CSADQ9Y600 493 aa8.31□□□□□ -1.08
CRNDE-208ENST00000560029 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
CRNDE-208ENST00000560029 FCGRTP55899 365 aa8.3□□□□□ -1.08
CRNDE-208ENST00000560029 DTHD1Q6ZMT9 781 aa8.3□□□□□ -1.08
CRNDE-208ENST00000560029 FAM214BQ7L5A3 538 aa8.3□□□□□ -1.08
CRNDE-208ENST00000560029 TMC4Q7Z404 712 aa8.3□□□□□ -1.08
CRNDE-208ENST00000560029 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
CRNDE-208ENST00000560029 MAP1SQ66K74 1059 aaPredicted RBP8.29□□□□□ -1.08
CRNDE-208ENST00000560029 MPRIPQ6WCQ1 1025 aa8.29□□□□□ -1.08
CRNDE-208ENST00000560029 MRS2Q9HD23 443 aa8.29□□□□□ -1.08
CRNDE-208ENST00000560029 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
CRNDE-208ENST00000560029 CTNND2Q9UQB3 1225 aa8.29□□□□□ -1.08
CRNDE-208ENST00000560029 SORBS3O60504 671 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 ZC3H12AQ5D1E8 599 aaKnown RBP8.28□□□□□ -1.08
CRNDE-208ENST00000560029 PRR23BQ6ZRT6 265 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 SPACA3Q8IXA5 215 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 ASB11Q8WXH4 323 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 C12orf49Q9H741 205 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 KIAA1522Q9P206 1035 aaPredicted RBP8.28□□□□□ -1.08
CRNDE-208ENST00000560029 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 SNX11Q9Y5W9 270 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 AK5Q9Y6K8 562 aa8.28□□□□□ -1.08
CRNDE-208ENST00000560029 GIPC1O14908 333 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
CRNDE-208ENST00000560029 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 NKPD1Q17RQ9 610 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
CRNDE-208ENST00000560029 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
CRNDE-208ENST00000560029 SULF2Q8IWU5 870 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 RNF214Q8ND24 703 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 FAM53CQ9NYF3 392 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.09
CRNDE-208ENST00000560029 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
CRNDE-208ENST00000560029 C1QL4Q86Z23 238 aa8.26□□□□□ -1.09
CRNDE-208ENST00000560029 LRRC56Q8IYG6 542 aaPredicted RBP8.26□□□□□ -1.09
CRNDE-208ENST00000560029 GPBAR1Q8TDU6 330 aa8.26□□□□□ -1.09
CRNDE-208ENST00000560029 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
CRNDE-208ENST00000560029 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
CRNDE-208ENST00000560029 USP17L7P0C7H9 530 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 MRPL58Q14197 206 aaKnown RBP8.25□□□□□ -1.09
CRNDE-208ENST00000560029 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 MPZL3Q6UWV2 235 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 KCNK12Q9HB15 430 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 GTF2IRD1Q9UHL9 959 aa8.25□□□□□ -1.09
CRNDE-208ENST00000560029 RBAK-RBAKDNI3L0D1 243 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 ARNTP27540 789 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 ERVK-24P63145 666 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 BHLHE22Q8NFJ8 381 aaPredicted RBP8.24□□□□□ -1.09
CRNDE-208ENST00000560029 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 CBX8Q9HC52 389 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 AKAP2Q9Y2D5 859 aa8.24□□□□□ -1.09
CRNDE-208ENST00000560029 DCDC2CA8MYV0 355 aa8.23□□□□□ -1.09
CRNDE-208ENST00000560029 CTSHP09668 335 aa8.23□□□□□ -1.09
CRNDE-208ENST00000560029 C1QTNF9P0C862 333 aa8.23□□□□□ -1.09
CRNDE-208ENST00000560029 AFMP43652 599 aa8.23□□□□□ -1.09
CRNDE-208ENST00000560029 HNRNPUQ00839 825 aaKnown RBP eCLIP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms