RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	CCDC192	P0DO97	292 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	SRGN	P10124	158 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	USP5	P45974	858 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	MAP3K11	Q16584	847 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	HS1BP3	Q53T59	392 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	IFIT1B	Q5T764	474 aa	Known RBP	12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	MICU3	Q86XE3	530 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	ZNF654	Q8IZM8	581 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	MPND	Q8N594	471 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	BICD2	Q8TD16	824 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	ANKS1A	Q92625	1134 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	TRIM44	Q96DX7	344 aa	Predicted RBP	12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	RNF26	Q9BY78	433 aa	Predicted RBP	12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	RBSN	Q9H1K0	784 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	NUP62CL	Q9H1M0	184 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	PLSCR2	Q9NRY7	297 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	TAOK2	Q9UL54	1235 aa		12.45	□□□□□ -0.42
LRRC49-215	ENST00000559201	MROH7-TTC4	A0A0A0MT08	1334 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	RANBP6	O60518	1105 aa	Known RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	CDC27	P30260	824 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	KIF23	Q02241	960 aa	Predicted RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	GNL2	Q13823	731 aa	Known RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	SF3A1	Q15459	793 aa	Known RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	GRIPAP1	Q4V328	841 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	C12orf60	Q5U649	245 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	ADAL	Q6DHV7	355 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	STYK1	Q6J9G0	422 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	CCDC73	Q6ZRK6	1079 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	DGKH	Q86XP1	1220 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	FAM177A1	Q8N128	213 aa	Predicted RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	TCP11L1	Q9NUJ3	509 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	MCM9	Q9NXL9	1143 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	C4A	P0C0L4	1744 aa		12.44	□□□□□ -0.42
LRRC49-215	ENST00000559201	TNKS	O95271	1327 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	UBR3	Q6ZT12	1888 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	COL4A1	P02462	1669 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	PRPF3	O43395	683 aa	Known RBP	12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	U2AF2	P26368	475 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	GNAQ	P50148	359 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	STK38	Q15208	465 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	ZNF827	Q17R98	1081 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	MYSM1	Q5VVJ2	828 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	KRT40	Q6A162	431 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	CC2D2B	Q6DHV5	1058 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	FAM173B	Q6P4H8	233 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	USP28	Q96RU2	1077 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	MRI	Q9BWK5	157 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	SLC26A6	Q9BXS9	759 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	FOXP1	Q9H334	677 aa	Predicted RBP	12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	CLSTN2	Q9H4D0	955 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	INCENP	Q9NQS7	918 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	POLL	Q9UGP5	575 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	MKRN1	Q9UHC7	482 aa	Known RBP	12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	TACC3	Q9Y6A5	838 aa		12.43	□□□□□ -0.42
LRRC49-215	ENST00000559201	KIF5B	P33176	963 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	ME1	P48163	572 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	FKBP1A	P62942	108 aa	Known RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	GUCY1B3	Q02153	619 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	ANO1	Q5XXA6	986 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	DPP8	Q6V1X1	898 aa	Predicted RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	RBM43	Q6ZSC3	357 aa	Known RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	FAM43A	Q8N2R8	423 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	ENAH	Q8N8S7	591 aa	Predicted RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	LINC00301	Q8NCQ3	95 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	CTCFL	Q8NI51	663 aa	Predicted RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	PGBD1	Q96JS3	809 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	TNMD	Q9H2S6	317 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	MKNK2	Q9HBH9	465 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	ROBO3	Q96MS0	1386 aa		12.42	□□□□□ -0.42
LRRC49-215	ENST00000559201	LAMA4	Q16363	1823 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	GAK	O14976	1311 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	TSPY2	A6NKD2	308 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201		H0YIN7	160 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	SPTLC2	O15270	562 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	PPP6R2	O75170	966 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	MMP10	P09238	476 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	FAM160A1	Q05DH4	1040 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	SLC39A14	Q15043	492 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	PODN	Q7Z5L7	613 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	CCAR1	Q8IX12	1150 aa	Known RBP	12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	CNKSR1	Q969H4	720 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	LZTS2	Q9BRK4	669 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	PANK2	Q9BZ23	570 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	BRMS1	Q9HCU9	246 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	STK32B	Q9NY57	414 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	DACT1	Q9NYF0	836 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	CEP131	Q9UPN4	1083 aa		12.41	□□□□□ -0.42
LRRC49-215	ENST00000559201	CACNA1S	Q13698	1873 aa		12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201		G3V3G9	751 aa		12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201	KIN	O60870	393 aa	Known RBP	12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201	DTNB	O60941	627 aa		12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201	POLR3D	P05423	398 aa	Predicted RBP	12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201	LIG1	P18858	919 aa		12.4	□□□□□ -0.42
LRRC49-215	ENST00000559201	RILPL1	Q5EBL4	403 aa		12.4	□□□□□ -0.42

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