RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 KCND1Q9NSA2 647 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 HPSEQ9Y251 543 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 GOLGA8AA7E2F4 631 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPNE6-210ENST00000558995 SYKP43405 635 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 BCAMP50895 628 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 CHRNDQ07001 517 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 PTPAQ15257 358 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 NAPBQ9H115 298 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 FAM217BQ9NTX9 383 aaPredicted RBP15.45■□□□□ 0.06
CPNE6-210ENST00000558995 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
CPNE6-210ENST00000558995 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 FAM237AA0A1B0GTK4 181 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 BIN1O00499 593 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 MAGEB6Q8N7X4 407 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 CCDC112Q8NEF3 446 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 MAP3K14Q99558 947 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 CNNM2Q9H8M5 875 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 EPB41L4AQ9HCS5 686 aaPredicted RBP15.44■□□□□ 0.06
CPNE6-210ENST00000558995 AFF2P51816 1311 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 NYAP1Q6ZVC0 841 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 ZSWIM5Q9P217 1185 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 SLC12A7Q9Y666 1083 aa15.44■□□□□ 0.06
CPNE6-210ENST00000558995 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 IKBKBO14920 756 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 RANBP6O60518 1105 aaKnown RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 MBD4O95243 580 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 DHX8Q14562 1220 aaKnown RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 NCAPHQ15003 741 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 PTPN14Q15678 1187 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 XPO4Q9C0E2 1151 aaKnown RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 TUBE1Q9UJT0 475 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 USP27XA6NNY8 438 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 RPS6KA4O75676 772 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 SMC2O95347 1197 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 SHC4Q6S5L8 630 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 KRT23Q9C075 422 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 IFNKQ9P0W0 207 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 IQSEC3Q9UPP2 1182 aaPredicted RBP15.43■□□□□ 0.06
CPNE6-210ENST00000558995 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 BTAF1O14981 1849 aa15.43■□□□□ 0.06
CPNE6-210ENST00000558995 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
CPNE6-210ENST00000558995 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 SSRP1Q08945 709 aaKnown RBP15.42■□□□□ 0.06
CPNE6-210ENST00000558995 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 CCAR2Q8N163 923 aaKnown RBP15.42■□□□□ 0.06
CPNE6-210ENST00000558995 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 WASF1Q92558 559 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 INCENPQ9NQS7 918 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 NARFQ9UHQ1 456 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 THSD7AQ9UPZ6 1657 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 BCORQ6W2J9 1755 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 GNAT2P19087 354 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 RESP18Q5W5W9 173 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 CCDC150Q8NCX0 1101 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 ARMT1Q9H993 441 aa15.42■□□□□ 0.06
CPNE6-210ENST00000558995 GSG1L2A8MUP6 293 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 CUTAO60888 179 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 SLC26A6Q9BXS9 759 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 IFNAR1P17181 557 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 MFSD6Q6ZSS7 791 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 CDC5LQ99459 802 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 TAF1P21675 1872 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 NID2Q14112 1375 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 ZNF592Q92610 1267 aa15.41■□□□□ 0.06
CPNE6-210ENST00000558995 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
CPNE6-210ENST00000558995 ZNF831Q5JPB2 1677 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 IGSF3O75054 1194 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 ZPR1O75312 459 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
CPNE6-210ENST00000558995 TMC6Q7Z403 805 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 ANKRD18AQ8IVF6 992 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 TACC3Q9Y6A5 838 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 PNPLA7Q6ZV29 1317 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
CPNE6-210ENST00000558995 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
CPNE6-210ENST00000558995 MTA3Q9BTC8 594 aa15.4■□□□□ 0.06
CPNE6-210ENST00000558995 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
CPNE6-210ENST00000558995 GYG1P46976 350 aa15.39■□□□□ 0.05
CPNE6-210ENST00000558995 FANCCQ00597 558 aa15.39■□□□□ 0.05
CPNE6-210ENST00000558995 SAFBQ15424 915 aaKnown RBP eCLIP15.39■□□□□ 0.05
CPNE6-210ENST00000558995 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
CPNE6-210ENST00000558995 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
CPNE6-210ENST00000558995 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms