RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 MCAMP43121 646 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
AP3S2-206ENST00000558806 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 UBE2Q1Q7Z7E8 422 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 U2AF1L4Q8WU68 220 aaKnown RBP13.17□□□□□ -0.3
AP3S2-206ENST00000558806 COA7Q96BR5 231 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
AP3S2-206ENST00000558806 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
AP3S2-206ENST00000558806 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
AP3S2-206ENST00000558806 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 SGPL1O95470 568 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 INHAP05111 366 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 CAP2P40123 477 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 SPP2Q13103 211 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
AP3S2-206ENST00000558806 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
AP3S2-206ENST00000558806 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
AP3S2-206ENST00000558806 BCAR3O75815 825 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
AP3S2-206ENST00000558806 BAG3O95817 575 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 ELNP15502 786 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 PLCG2P16885 1265 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
AP3S2-206ENST00000558806 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
AP3S2-206ENST00000558806 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 NR2E3Q9Y5X4 410 aa13.15□□□□□ -0.3
AP3S2-206ENST00000558806 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.31
AP3S2-206ENST00000558806 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 IGSF3O75054 1194 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 HMGCS2P54868 508 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
AP3S2-206ENST00000558806 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
AP3S2-206ENST00000558806 MAST2Q6P0Q8 1798 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
AP3S2-206ENST00000558806 ASNSP08243 561 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
AP3S2-206ENST00000558806 POLA2Q14181 598 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 TMEM57Q8N5G2 664 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 DEFB118Q96PH6 123 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 PAK6Q9NQU5 681 aaPredicted RBP13.13□□□□□ -0.31
AP3S2-206ENST00000558806 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
AP3S2-206ENST00000558806 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
AP3S2-206ENST00000558806 PPP4CP60510 307 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
AP3S2-206ENST00000558806 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-206ENST00000558806 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 TRIM34Q9BYJ4 488 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
AP3S2-206ENST00000558806 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
AP3S2-206ENST00000558806 FLT1P17948 1338 aa13.12□□□□□ -0.31
AP3S2-206ENST00000558806 HMGCRP04035 888 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-206ENST00000558806 BACE1P56817 501 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-206ENST00000558806 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 MTMR2Q13614 643 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
AP3S2-206ENST00000558806 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-206ENST00000558806 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
AP3S2-206ENST00000558806 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 TMOD4Q9NZQ9 345 aa13.11□□□□□ -0.31
AP3S2-206ENST00000558806 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
AP3S2-206ENST00000558806 EVI5O60447 810 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
AP3S2-206ENST00000558806 HLA-DOAP06340 250 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
AP3S2-206ENST00000558806 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
AP3S2-206ENST00000558806 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
AP3S2-206ENST00000558806 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
AP3S2-206ENST00000558806 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 ZAP70P43403 619 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
AP3S2-206ENST00000558806 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms