RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PNMA3Q9UL41 463 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 TCF20Q9UGU0 1960 aaKnown RBP15.03■□□□□ -0
SMAD3-206ENST00000558739 MYH2Q9UKX2 1941 aa15.03■□□□□ -0
SMAD3-206ENST00000558739 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
SMAD3-206ENST00000558739 RTP1P59025 263 aa15.02■□□□□ -0
SMAD3-206ENST00000558739 CAVIN4Q5BKX8 364 aa15.02■□□□□ -0
SMAD3-206ENST00000558739 BADQ92934 168 aa15.02■□□□□ -0
SMAD3-206ENST00000558739 NECAB3Q96P71 396 aaPredicted RBP15.02■□□□□ -0
SMAD3-206ENST00000558739 DDX4Q9NQI0 724 aaKnown RBP15.02■□□□□ -0
SMAD3-206ENST00000558739 SUGT1Q9Y2Z0 365 aa15.02■□□□□ -0
SMAD3-206ENST00000558739 LRRFIP2Q9Y608 721 aaKnown RBP15.02■□□□□ -0
SMAD3-206ENST00000558739 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 GRM8O00222 908 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 GCLCP48506 637 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-206ENST00000558739 SPP2Q13103 211 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 PPM1EQ8WY54 764 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 PRDM5Q9NQX1 630 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-206ENST00000558739 ATP11BQ9Y2G3 1177 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 CACNA1FO60840 1977 aa15.01□□□□□ -0.01
SMAD3-206ENST00000558739 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
SMAD3-206ENST00000558739 CTNND1O60716 968 aaKnown RBP15□□□□□ -0.01
SMAD3-206ENST00000558739 CALD1Q05682 793 aaKnown RBP15□□□□□ -0.01
SMAD3-206ENST00000558739 RALBP1Q15311 655 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 METTL24Q5JXM2 366 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 SH3RF1Q7Z6J0 888 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 PROCA1Q8NCQ7 364 aaPredicted RBP15□□□□□ -0.01
SMAD3-206ENST00000558739 KLHDC4Q8TBB5 520 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 USP6NLQ92738 828 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 NUDT12Q9BQG2 462 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 PORCNQ9H237 461 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 MORF4L1Q9UBU8 362 aa15□□□□□ -0.01
SMAD3-206ENST00000558739 XRCC5P13010 732 aaKnown RBP14.99□□□□□ -0.01
SMAD3-206ENST00000558739 EPHB4P54760 987 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 MAP3K10Q02779 954 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 RRP1BQ14684 758 aaKnown RBP14.99□□□□□ -0.01
SMAD3-206ENST00000558739 POTEEQ6S8J3 1075 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 ZSCAN29Q8IWY8 852 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-206ENST00000558739 SOCS4Q8WXH5 440 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 UHRF1Q96T88 793 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-206ENST00000558739 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 FLRT1Q9NZU1 646 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 PRKAG2Q9UGJ0 569 aa14.99□□□□□ -0.01
SMAD3-206ENST00000558739 PDE8BO95263 885 aa14.98□□□□□ -0.01
SMAD3-206ENST00000558739 ITGB8P26012 769 aa14.98□□□□□ -0.01
SMAD3-206ENST00000558739 TRIM43BA6NCK2 446 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 FGFR2P21802 821 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 PICALMQ13492 652 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 TRIM60Q495X7 471 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 TRIM43Q96BQ3 446 aaPredicted RBP14.97□□□□□ -0.01
SMAD3-206ENST00000558739 ASB2Q96Q27 587 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 P2RX7Q99572 595 aaKnown RBP14.97□□□□□ -0.01
SMAD3-206ENST00000558739 PDLIM7Q9NR12 457 aa14.97□□□□□ -0.01
SMAD3-206ENST00000558739 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 DNAJB2P25686 324 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 Q3C1V9 767 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 MORN1Q5T089 497 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 GJC2Q5T442 439 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-206ENST00000558739 GPR142Q7Z601 462 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 ZNF280CQ8ND82 737 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 WDR66Q8TBY9 1149 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
SMAD3-206ENST00000558739 APBA2Q99767 749 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 IDI2Q9BXS1 227 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 BICC1Q9H694 974 aaKnown RBP14.96□□□□□ -0.01
SMAD3-206ENST00000558739 THEGQ9P2T0 379 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 NDUFB9Q9Y6M9 179 aa14.96□□□□□ -0.01
SMAD3-206ENST00000558739 SIPA1L1O43166 1804 aa14.95□□□□□ -0.02
SMAD3-206ENST00000558739 ENTPD3O75355 529 aa14.95□□□□□ -0.02
SMAD3-206ENST00000558739 NBPF7P0C2Y1 421 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-206ENST00000558739 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
SMAD3-206ENST00000558739 SHROOM1Q2M3G4 852 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-206ENST00000558739 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
SMAD3-206ENST00000558739 TRPV1Q8NER1 839 aa14.95□□□□□ -0.02
SMAD3-206ENST00000558739 C9orf78Q9NZ63 289 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-206ENST00000558739 DDX20Q9UHI6 824 aaKnown RBP14.95□□□□□ -0.02
SMAD3-206ENST00000558739 BRWD1Q9NSI6 2320 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 DNM1LO00429 736 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 LDHBP07195 334 aaKnown RBP14.94□□□□□ -0.02
SMAD3-206ENST00000558739 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-206ENST00000558739 RGS2P41220 211 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 HERVK_113P62684 666 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-206ENST00000558739 MTMR2Q13614 643 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 PUM3Q15397 648 aaKnown RBP14.94□□□□□ -0.02
SMAD3-206ENST00000558739 GPRC5AQ8NFJ5 357 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 ATXN2LQ8WWM7 1075 aaKnown RBP14.94□□□□□ -0.02
SMAD3-206ENST00000558739 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 PLXNA1Q9UIW2 1896 aa14.94□□□□□ -0.02
SMAD3-206ENST00000558739 GAKO14976 1311 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 CNGA1P29973 690 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 ERVK-9P63128 1117 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 ERVK-24P63145 666 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 LPAR1Q92633 364 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 PAGR1Q9BTK6 254 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 ZNF576Q9H609 170 aa14.93□□□□□ -0.02
SMAD3-206ENST00000558739 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
SMAD3-206ENST00000558739 CYP2C19P33261 490 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms