RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TRAF5O00463 557 aa15.56■□□□□ 0.08
SPG11-210ENST00000558319 WHAMMP3Q1A5X7 153 aa15.56■□□□□ 0.08
SPG11-210ENST00000558319 CNNM2Q9H8M5 875 aa15.56■□□□□ 0.08
SPG11-210ENST00000558319 PPIP5K1Q6PFW1 1433 aa15.56■□□□□ 0.08
SPG11-210ENST00000558319 BMP15O95972 392 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 ERCC6LQ2NKX8 1250 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 FAM173BQ6P4H8 233 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 IFT20Q8IY31 132 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 GPR161Q8N6U8 529 aaKnown RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 ABCC11Q96J66 1382 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 LIG3P49916 1009 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 RNF168Q8IYW5 571 aaPredicted RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 RPSAP08865 295 aaKnown RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 COG7P83436 770 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 MAP7Q14244 749 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 SH2D4BQ5SQS7 431 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 TTC19Q6DKK2 380 aaPredicted RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
SPG11-210ENST00000558319 NELFCDQ8IXH7 590 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 ANKRD42Q8N9B4 389 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 BIRC2Q13490 618 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 USP37Q86T82 979 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
SPG11-210ENST00000558319 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
SPG11-210ENST00000558319 NOP56O00567 594 aaKnown RBP15.54■□□□□ 0.08
SPG11-210ENST00000558319 HDAC1Q13547 482 aaPredicted RBP15.54■□□□□ 0.08
SPG11-210ENST00000558319 PRR16Q569H4 304 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 HHATQ5VTY9 493 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 IL2RBP14784 551 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
SPG11-210ENST00000558319 CBX8Q9HC52 389 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 CYP26C1Q6V0L0 522 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 MYO1AQ9UBC5 1043 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 BAG2O95816 211 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 TUBBP07437 444 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
SPG11-210ENST00000558319 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 CETN3O15182 167 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 CCDC14Q49A88 953 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 KIAA1524Q8TCG1 905 aa15.54■□□□□ 0.08
SPG11-210ENST00000558319 RBM17Q96I25 401 aaKnown RBP15.54■□□□□ 0.08
SPG11-210ENST00000558319 GUCY2FP51841 1108 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 DACT3Q96B18 629 aaPredicted RBP15.53■□□□□ 0.08
SPG11-210ENST00000558319 MYCBPQ99417 103 aaPredicted RBP15.53■□□□□ 0.08
SPG11-210ENST00000558319 GPHNQ9NQX3 736 aaPredicted RBP15.53■□□□□ 0.08
SPG11-210ENST00000558319 CNGA1P29973 690 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 ATP1A2P50993 1020 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 TMOD4Q9NZQ9 345 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 FRMD4BQ9Y2L6 1034 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 ZNF75DP51815 510 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 FANCCQ00597 558 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 FAM47CQ5HY64 1035 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 PHKBQ93100 1093 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 NYXQ9GZU5 481 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 KSR2Q6VAB6 950 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 ITGA6P23229 1130 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 GNGT1P63211 74 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 ITIH3Q06033 890 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 TBC1D8BQ0IIM8 1120 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 C4orf50Q6ZRC1 276 aa15.53■□□□□ 0.08
SPG11-210ENST00000558319 PDE4DQ08499 809 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 RUFY3Q7L099 469 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 CCDC117Q8IWD4 279 aaPredicted RBP15.52■□□□□ 0.08
SPG11-210ENST00000558319 RILPQ96NA2 401 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 G2E3Q7L622 706 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 CXorf38Q8TB03 319 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 WDR7Q9Y4E6 1490 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 TAOK1Q7L7X3 1001 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.08
SPG11-210ENST00000558319 CEP104O60308 925 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 COBLO75128 1261 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 SMIM24O75264 130 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 MAN1A1P33908 653 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 SESTD1Q86VW0 696 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.07
SPG11-210ENST00000558319 ACTN4O43707 911 aaKnown RBP15.52■□□□□ 0.07
SPG11-210ENST00000558319 TOM1O60784 492 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 CASC4Q6P4E1 433 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 METTL13Q8N6R0 699 aa15.52■□□□□ 0.07
SPG11-210ENST00000558319 FRMPD2Q68DX3 1309 aaPredicted RBP15.52■□□□□ 0.07
SPG11-210ENST00000558319 IL15P40933 162 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 AP1ARQ63HQ0 302 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 TNFAIP3P21580 790 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 FOXD4Q12950 439 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 MAPKAPK5Q8IW41 473 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 FAM204AQ9H8W3 233 aa15.51■□□□□ 0.07
SPG11-210ENST00000558319 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 SECISBP2LQ93073 1101 aaKnown RBP15.51■□□□□ 0.07
SPG11-210ENST00000558319 ASIC3Q9UHC3 531 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms