RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 COL1A1P02452 1464 aaPredicted RBP10.35□□□□□ -0.75
PPP4R3A-212ENST00000557382 ORC4O43929 436 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 NEMFO60524 1076 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 MMP1P03956 469 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 GNL2Q13823 731 aaKnown RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 PTPAQ15257 358 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 C15orf52Q6ZUT6 534 aaKnown RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 NBPF11Q86T75 865 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 MIGA1Q8NAN2 632 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 FANCBQ8NB91 859 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 CELF1Q92879 486 aaKnown RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 C8orf37Q96NL8 207 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 MAP3K14Q99558 947 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 SDF4Q9BRK5 362 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 RNF26Q9BY78 433 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 TRIM5Q9C035 493 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 SENP2Q9HC62 589 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 ATP8A2Q9NTI2 1148 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 RBM28Q9NW13 759 aaKnown RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
PPP4R3A-212ENST00000557382 BECN2A8MW95 431 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 GNPATO15228 680 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 MYO1BO43795 1136 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 DDAH1O94760 285 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 ZNF202O95125 648 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 XBP1P17861 261 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 NDUFA8P51970 172 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 NOLC1Q14978 699 aaKnown RBP eCLIP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 ZRSR1Q15695 479 aaKnown RBP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 RILPL1Q5EBL4 403 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 IQCA1Q86XH1 822 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 RAB11FIP4Q86YS3 637 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 ZNF654Q8IZM8 581 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 PHKBQ93100 1093 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 NSUN4Q96CB9 384 aaKnown RBP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 SLC26A6Q9BXS9 759 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 USP21Q9UK80 565 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 CEP131Q9UPN4 1083 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 IRS2Q9Y4H2 1338 aa10.33□□□□□ -0.76
PPP4R3A-212ENST00000557382 A0A1B0GVL5 298 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 UBAP1LF5GYI3 381 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 HAX1O00165 279 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 PRPF3O43395 683 aaKnown RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 PFKFB1P16118 471 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 TM4SF1P30408 202 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 NLRP12P59046 1061 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 EVX2Q03828 476 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 CCDC178Q5BJE1 867 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 RESP18Q5W5W9 173 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 C11orf57Q6ZUT1 292 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 ZNF579Q8NAF0 562 aaKnown RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 PRIMPOLQ96LW4 560 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 ZSCAN10Q96SZ4 725 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 TTC12Q9H892 705 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 INCENPQ9NQS7 918 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 ARPP21Q9UBL0 812 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 TUBE1Q9UJT0 475 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 TNKSO95271 1327 aa10.32□□□□□ -0.76
PPP4R3A-212ENST00000557382 MINDY4BA8MYZ0 360 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 IKBKBO14920 756 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 BMP15O95972 392 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 RXRAP19793 462 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 SYKP43405 635 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 TPM4P67936 248 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 GSTO1P78417 241 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 GRAPQ13588 217 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 CTR9Q6PD62 1173 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 CATIPQ7Z7H3 387 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 WDR66Q8TBY9 1149 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 GRAPLQ8TC17 118 aaPredicted RBP10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 SDR42E1Q8WUS8 393 aa10.31□□□□□ -0.76
PPP4R3A-212ENST00000557382 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms