RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 BTDP43251 543 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 PHKA1P46020 1223 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 SOCS4Q8WXH5 440 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 SIL1Q9H173 461 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 DHX36Q9H2U1 1008 aaKnown RBP12.64□□□□□ -0.39
RDH11-210ENST00000557331 RFX7Q2KHR2 1363 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
RDH11-210ENST00000557331 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
RDH11-210ENST00000557331 DOCK2Q92608 1830 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
RDH11-210ENST00000557331 PLCG2P16885 1265 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 SPP2Q13103 211 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 FAM9BQ8IZU0 186 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
RDH11-210ENST00000557331 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
RDH11-210ENST00000557331 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 OGDHLQ9ULD0 1010 aa12.63□□□□□ -0.39
RDH11-210ENST00000557331 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 ASNSP08243 561 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
RDH11-210ENST00000557331 CAP2P40123 477 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
RDH11-210ENST00000557331 PICALMQ13492 652 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 STXBP5LQ9Y2K9 1186 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 PTPRFP10586 1907 aa12.62□□□□□ -0.39
RDH11-210ENST00000557331 BAG3O95817 575 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 MAPK4P31152 587 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 RHBDL3P58872 404 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 MECOMQ03112 1051 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
RDH11-210ENST00000557331 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
RDH11-210ENST00000557331 DEFB123Q8N688 67 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 ASCC2Q9H1I8 757 aaPredicted RBP12.61□□□□□ -0.39
RDH11-210ENST00000557331 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
RDH11-210ENST00000557331 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
RDH11-210ENST00000557331 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
RDH11-210ENST00000557331 GNAI3P08754 354 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 HMGCS2P54868 508 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 BACE1P56817 501 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 MAP3K21Q5TCX8 1036 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 C7orf61Q8IZ16 206 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
RDH11-210ENST00000557331 SOX1O00570 391 aaPredicted RBP12.59□□□□□ -0.39
RDH11-210ENST00000557331 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 TIMM10P62072 90 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
RDH11-210ENST00000557331 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 SPATA5Q8NB90 893 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
RDH11-210ENST00000557331 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
RDH11-210ENST00000557331 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
RDH11-210ENST00000557331 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
RDH11-210ENST00000557331 ADORA1P30542 326 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 RGS2P41220 211 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 CCNA1P78396 465 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 MTX1Q13505 466 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
RDH11-210ENST00000557331 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
RDH11-210ENST00000557331 RAI14Q9P0K7 980 aa12.58□□□□□ -0.4
RDH11-210ENST00000557331 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 MSCO60682 206 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
RDH11-210ENST00000557331 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
RDH11-210ENST00000557331 PPP4CP60510 307 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
RDH11-210ENST00000557331 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 MTMR10Q9NXD2 777 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
RDH11-210ENST00000557331 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
RDH11-210ENST00000557331 LAMA2P24043 3122 aaKnown RBP12.56□□□□□ -0.4
RDH11-210ENST00000557331 COL6A1P12109 1028 aa12.56□□□□□ -0.4
RDH11-210ENST00000557331 CYP2B6P20813 491 aa12.56□□□□□ -0.4
RDH11-210ENST00000557331 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
RDH11-210ENST00000557331 HERVK_113P62684 666 aa12.56□□□□□ -0.4
RDH11-210ENST00000557331 TRIB2Q92519 343 aa12.56□□□□□ -0.4
RDH11-210ENST00000557331 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms