RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-247ENST00000557311 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 COL15A1P39059 1388 aa6.56□□□□□ -1.36
ATXN3-247ENST00000557311 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 NPHP1O15259 732 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PDIA4P13667 645 aaKnown RBP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 NPM2Q86SE8 214 aaKnown RBP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 C7orf43Q8WVR3 580 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PBXIP1Q96AQ6 731 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 ZIC5Q96T25 663 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 ZCCHC2Q9C0B9 1178 aaKnown RBP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PHACTR1Q9C0D0 580 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 CRISPLD1Q9H336 500 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-247ENST00000557311 PCDHGC4Q9Y5F7 938 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
ATXN3-247ENST00000557311 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 THBS1P07996 1170 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 FGFR3P22607 806 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 IL13P35225 146 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-247ENST00000557311 FKBP4Q02790 459 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-247ENST00000557311 NLRP8Q86W28 1048 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 CFHR5Q9BXR6 569 aa6.54□□□□□ -1.36
ATXN3-247ENST00000557311 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-247ENST00000557311 ATXN7L1Q9ULK2 861 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-247ENST00000557311 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-247ENST00000557311 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-247ENST00000557311 EML1O00423 815 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 PRMT3O60678 531 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 DKK1O94907 266 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 BCRP11274 1271 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 PRR12Q9ULL5 1215 aa6.53□□□□□ -1.36
ATXN3-247ENST00000557311 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 BNIP3LO60238 219 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-247ENST00000557311 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
ATXN3-247ENST00000557311 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-247ENST00000557311 ALDH16A1Q8IZ83 802 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 STK32AQ8WU08 396 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 CEP63Q96MT8 703 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 SPOCK3Q9BQ16 436 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 PANK3Q9H999 370 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATXN3-247ENST00000557311 ENAMQ9NRM1 1142 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 ANKIB1Q9P2G1 1089 aa6.52□□□□□ -1.37
ATXN3-247ENST00000557311 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 A1BGP04217 495 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 CD33P20138 364 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 IGFBP4P22692 258 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 MAP2K3P46734 347 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 DGKZQ13574 1117 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
ATXN3-247ENST00000557311 BEND7Q8N7W2 519 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 C2orf49Q9BVC5 232 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-247ENST00000557311 MSTNO14793 375 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 AOC2O75106 756 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 ATG7O95352 703 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 PROCP04070 461 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 MAPTP10636 758 aaKnown RBP6.5□□□□□ -1.37
ATXN3-247ENST00000557311 SNRPNP63162 240 aaKnown RBP6.5□□□□□ -1.37
ATXN3-247ENST00000557311 CTBSQ01459 385 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 PDE4CQ08493 712 aa6.5□□□□□ -1.37
ATXN3-247ENST00000557311 HIF1AQ16665 826 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms