RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 NDUFB5O43674 189 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 MTRF1O75570 445 aaKnown RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 THBS1P07996 1170 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 MAPK1P28482 360 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 CYP2C19P33261 490 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 NF2P35240 595 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 MAGEA9P43362 315 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 IDH3AP50213 366 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 ZNF131P52739 623 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 ZC3H6P61129 1189 aaKnown RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 SKOR2Q2VWA4 1001 aaPredicted RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 TBC1D25Q3MII6 688 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 TEX35Q5T0J7 233 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 SAMD5Q5TGI4 173 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 MMS22LQ6ZRQ5 1243 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 CCDC186Q7Z3E2 898 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 TTC30AQ86WT1 665 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 SPATS2Q86XZ4 545 aaKnown RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 RNF214Q8ND24 703 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 TAF4BQ92750 862 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 RBCK1Q9BYM8 510 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 ZCCHC2Q9C0B9 1178 aaKnown RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 LRRC27Q9C0I9 530 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 CUEDC1Q9NWM3 386 aaPredicted RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 C6orf203Q9P0P8 240 aaPredicted RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 RABL2AQ9UBK7 228 aaPredicted RBP7.16□□□□□ -1.26
TDP1-215ENST00000556498 MAFFQ9ULX9 164 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
TDP1-215ENST00000556498 H7C1W4 665 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 PLIN1O60240 522 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 SNUPNO95149 360 aaKnown RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 TGFB3P10600 412 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 MNAT1P51948 309 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 POU5F1BQ06416 359 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 GPS2Q13227 327 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 UBAP2LQ14157 1087 aaKnown RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 CRYMQ14894 314 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 PTPROQ16827 1216 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 TEX11Q8IYF3 940 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 TRIM22Q8IYM9 498 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 STK11IPQ8N1F8 1099 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 ANKRD7Q92527 254 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 EDEM1Q92611 657 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 MIEF2Q96C03 454 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 GPATCH3Q96I76 525 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 RPS6KC1Q96S38 1066 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 TRIM6Q9C030 488 aaPredicted RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 ZHX3Q9H4I2 956 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 TOMM22Q9NS69 142 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 ZNHIT6Q9NWK9 470 aaKnown RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 SPATA7Q9P0W8 599 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 KIAA1522Q9P206 1035 aaPredicted RBP7.15□□□□□ -1.26
TDP1-215ENST00000556498 DKK3Q9UBP4 350 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 PCSK1NQ9UHG2 260 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 POLIQ9UNA4 740 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 LZTS1Q9Y250 596 aa7.15□□□□□ -1.26
TDP1-215ENST00000556498 SCAPERQ9BY12 1400 aa7.15□□□□□ -1.27
TDP1-215ENST00000556498 PRDM2Q13029 1718 aa7.15□□□□□ -1.27
TDP1-215ENST00000556498 MYO1CO00159 1063 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 SPAG9O60271 1321 aaKnown RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 BBOX1O75936 387 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 PDGFAP04085 211 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ZNF24P17028 368 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ITGA6P23229 1130 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 HOXA10P31260 410 aaPredicted RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 USP5P45974 858 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ARSDP51689 593 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 HNRNPH2P55795 449 aaKnown RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 TYRO3Q06418 890 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 CGNL1Q0VF96 1302 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 GRIK3Q13003 919 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 KCTD2Q14681 263 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 KIAA0753Q2KHM9 967 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 CCDC144BQ3MJ40 725 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 FIGNL1Q6PIW4 674 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 FAM114A1Q8IWE2 563 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ZSCAN29Q8IWY8 852 aaPredicted RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 CCDC144CPQ8IYA2 1237 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 GIMAP7Q8NHV1 300 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 USP33Q8TEY7 942 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ANKRD24Q8TF21 1146 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 FRS2Q8WU20 508 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 KCNB2Q92953 911 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 RUNDC1Q96C34 613 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 DHTKD1Q96HY7 919 aaPredicted RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 GMCL1Q96IK5 515 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 FAM81BQ96LP2 452 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 TTC14Q96N46 770 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 RPAP3Q9H6T3 665 aaPredicted RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 HOMER3Q9NSC5 361 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 ZMAT5Q9UDW3 170 aaKnown RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
TDP1-215ENST00000556498 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms