RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 RPS6KA4O75676 772 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 MMP1P03956 469 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 CDC25BP30305 580 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 SYKP43405 635 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 SHC4Q6S5L8 630 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 CRACR2BQ8N4Y2 399 aaPredicted RBP12.21□□□□□ -0.46
NRXN3-213ENST00000556496 ZNF384Q8TF68 577 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 MRFAP1L1Q96HT8 127 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 TNKSO95271 1327 aa12.21□□□□□ -0.46
NRXN3-213ENST00000556496 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 FBXO33Q7Z6M2 555 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 NBPF11Q86T75 865 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
NRXN3-213ENST00000556496 CLIC6Q96NY7 704 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 DEXIO95424 95 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 RCAN1P53805 252 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 FAM182BQ5T319 152 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
NRXN3-213ENST00000556496 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
NRXN3-213ENST00000556496 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 HPSEQ9Y251 543 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 TAF1P21675 1872 aa12.2□□□□□ -0.46
NRXN3-213ENST00000556496 PRDM1O75626 825 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 SEC23AQ15436 765 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 CACTINQ8WUQ7 758 aaKnown RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 TIGD1Q96MW7 591 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 SEMA3EO15041 775 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 ENAHQ8N8S7 591 aaPredicted RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 NSUN4Q96CB9 384 aaKnown RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
NRXN3-213ENST00000556496 CHD4Q14839 1912 aa12.19□□□□□ -0.46
NRXN3-213ENST00000556496 CUTAO60888 179 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 NLRP12P59046 1061 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 MECOMQ03112 1051 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
NRXN3-213ENST00000556496 RESP18Q5W5W9 173 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 PRIMPOLQ96LW4 560 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 ANKRD2Q9GZV1 360 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 USP17L21D6R901 530 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 NPHP1O15259 732 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
NRXN3-213ENST00000556496 NR5A1Q13285 461 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 ISM2Q6H9L7 571 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
NRXN3-213ENST00000556496 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
NRXN3-213ENST00000556496 FOXP1Q9H334 677 aaPredicted RBP12.18□□□□□ -0.46
NRXN3-213ENST00000556496 AATFQ9NY61 560 aaKnown RBP eCLIP12.18□□□□□ -0.46
NRXN3-213ENST00000556496 HSP90AA2PQ14568 343 aaPredicted RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 IFIT1BQ5T764 474 aaKnown RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 FAM237AA0A1B0GTK4 181 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 PRDX5P30044 214 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 PPP2R5BQ15173 497 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 RILPL1Q5EBL4 403 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 SPECC1Q5M775 1068 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 KCNH3Q9ULD8 1083 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 ARID5BQ14865 1188 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 CATIPQ7Z7H3 387 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 LRRC8AQ8IWT6 810 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
NRXN3-213ENST00000556496 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
NRXN3-213ENST00000556496 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 PNOCQ13519 176 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
NRXN3-213ENST00000556496 CNNM3Q8NE01 707 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 USP21Q9UK80 565 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 PDS5AQ29RF7 1337 aaKnown RBP12.16□□□□□ -0.46
NRXN3-213ENST00000556496 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 FGRP09769 529 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 PCP11498 1178 aaKnown RBP12.16□□□□□ -0.46
NRXN3-213ENST00000556496 TM4SF1P30408 202 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 EVX2Q03828 476 aa12.16□□□□□ -0.46
NRXN3-213ENST00000556496 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
NRXN3-213ENST00000556496 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
NRXN3-213ENST00000556496 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms