RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
CHMP4BP1-201ENST00000556017 BCAR3O75815 825 aa17.75■□□□□ 0.43
CHMP4BP1-201ENST00000556017 IRF5Q13568 498 aa17.75■□□□□ 0.43
CHMP4BP1-201ENST00000556017 NKX2-3Q8TAU0 364 aa17.75■□□□□ 0.43
CHMP4BP1-201ENST00000556017 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SGPL1O95470 568 aa17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
CHMP4BP1-201ENST00000556017 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 INHAP05111 366 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 UBXN2AP68543 259 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SPP2Q13103 211 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 POLA2Q14181 598 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 PROCA1Q8NCQ7 364 aaPredicted RBP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SH3RF3Q8TEJ3 882 aaPredicted RBP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 BIN2Q9UBW5 565 aaPredicted RBP17.73■□□□□ 0.43
CHMP4BP1-201ENST00000556017 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 GNAI2P04899 355 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 CAP2P40123 477 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 FAM110CQ1W6H9 321 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SH3D19Q5HYK7 790 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 METTL16Q86W50 562 aaKnown RBP17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 ZNF280CQ8ND82 737 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 CRISPLD2Q9H0B8 497 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 GJD2Q9UKL4 321 aa17.72■□□□□ 0.43
CHMP4BP1-201ENST00000556017 CCER2I3L3R5 266 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 FARP2O94887 1054 aaPredicted RBP17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 LDHCP07864 332 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 HMGCS2P54868 508 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 DPF3Q92784 378 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 CLUAP1Q96AJ1 413 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
CHMP4BP1-201ENST00000556017 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PEX10O60683 326 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 GSTO1P78417 241 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 POTEEQ6S8J3 1075 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TMEM57Q8N5G2 664 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 DBNDD2Q9BQY9 259 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 SNRKQ9NRH2 765 aa17.7■□□□□ 0.42
CHMP4BP1-201ENST00000556017 COL6A3P12111 3177 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 MYH1P12882 1939 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 MNX1P50219 401 aaPredicted RBP17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PPP4CP60510 307 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TRIM32Q13049 653 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 SSH3Q8TE77 659 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
CHMP4BP1-201ENST00000556017 USP17L5A8MUK1 530 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 UQCRFS1P1P0C7P4 283 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 G3BP1Q13283 466 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 WDR18Q9BV38 432 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
CHMP4BP1-201ENST00000556017 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 DIS3LQ8TF46 1054 aaKnown RBP17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TXNRD2Q9NNW7 524 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PI4KBQ9UBF8 816 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PNMA3Q9UL41 463 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 FLT1P17948 1338 aa17.67■□□□□ 0.42
CHMP4BP1-201ENST00000556017 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 COA7Q96BR5 231 aa17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
CHMP4BP1-201ENST00000556017 RLBP1P12271 317 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 ZAP70P43403 619 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 BACE1P56817 501 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 MTMR2Q13614 643 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 MAPKAPK5Q8IW41 473 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PAWRQ96IZ0 340 aaKnown RBP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 P2RX7Q99572 595 aaKnown RBP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 PALD1Q9ULE6 856 aa17.65■□□□□ 0.42
CHMP4BP1-201ENST00000556017 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms