RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
TDP1-211ENST00000555178 JAG1P78504 1218 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 SBK1Q52WX2 424 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 NBPF12Q5TAG4 269 aaPredicted RBP12.78□□□□□ -0.36
TDP1-211ENST00000555178 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 SSC5DA1L4H1 1573 aa12.78□□□□□ -0.36
TDP1-211ENST00000555178 CYB5R4Q7L1T6 521 aa12.77□□□□□ -0.36
TDP1-211ENST00000555178 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.36
TDP1-211ENST00000555178 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.36
TDP1-211ENST00000555178 FAM151AQ8WW52 585 aa12.77□□□□□ -0.36
TDP1-211ENST00000555178 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.36
TDP1-211ENST00000555178 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.36
TDP1-211ENST00000555178 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.37
TDP1-211ENST00000555178 B4E1Z4 1266 aa12.77□□□□□ -0.37
TDP1-211ENST00000555178 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
TDP1-211ENST00000555178 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.77□□□□□ -0.37
TDP1-211ENST00000555178 ANAPC4Q9UJX5 808 aa12.77□□□□□ -0.37
TDP1-211ENST00000555178 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
TDP1-211ENST00000555178 ATAD5Q96QE3 1844 aa12.77□□□□□ -0.37
TDP1-211ENST00000555178 MYO1BO43795 1136 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 ENTPD3O75355 529 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 ANTXR2P58335 489 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 GABPAQ06546 454 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
TDP1-211ENST00000555178 MAP1SQ66K74 1059 aaPredicted RBP12.76□□□□□ -0.37
TDP1-211ENST00000555178 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
TDP1-211ENST00000555178 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
TDP1-211ENST00000555178 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 USP50Q70EL3 339 aaPredicted RBP12.76□□□□□ -0.37
TDP1-211ENST00000555178 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 TTC14Q96N46 770 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 NEK1Q96PY6 1258 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 ZKSCAN3Q9BRR0 538 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 TMOD2Q9NZR1 351 aa12.76□□□□□ -0.37
TDP1-211ENST00000555178 TRAF5O00463 557 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 NMT2O60551 498 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 DTNBO60941 627 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 SHMT1P34896 483 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 CDK8P49336 464 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
TDP1-211ENST00000555178 OTOFQ9HC10 1997 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
TDP1-211ENST00000555178 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
TDP1-211ENST00000555178 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
TDP1-211ENST00000555178 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
TDP1-211ENST00000555178 RASA1P20936 1047 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 FKBP1CQ5VVH2 108 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 FAM83AQ86UY5 434 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
TDP1-211ENST00000555178 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 ZSWIM5Q9P217 1185 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 IQCA1LA6NCM1 817 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 KDM4AO75164 1064 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 FGRP09769 529 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 MMP14P50281 582 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 AK2P54819 239 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 PRKG1Q13976 671 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 KRT32Q14532 448 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
TDP1-211ENST00000555178 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
TDP1-211ENST00000555178 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 PAPPA2Q9BXP8 1791 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 ST18O60284 1047 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 AKR1B1P15121 316 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 PSMA5P28066 241 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
TDP1-211ENST00000555178 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 SNX21Q969T3 373 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
TDP1-211ENST00000555178 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
TDP1-211ENST00000555178 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 GDF11O95390 407 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 LARGE1O95461 756 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 EXOSC10Q01780 885 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms