RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SPP2Q13103 211 aa29.87■■■□□ 2.37
FOXA1-204ENST00000554607 TREML2Q5T2D2 321 aa29.87■■■□□ 2.37
FOXA1-204ENST00000554607 CCDC84Q86UT8 332 aaPredicted RBP29.87■■■□□ 2.37
FOXA1-204ENST00000554607 ZNF280CQ8ND82 737 aa29.87■■■□□ 2.37
FOXA1-204ENST00000554607 ZNF384Q8TF68 577 aa29.87■■■□□ 2.37
FOXA1-204ENST00000554607 NSUN4Q96CB9 384 aaKnown RBP29.87■■■□□ 2.37
FOXA1-204ENST00000554607 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.87■■■□□ 2.37
FOXA1-204ENST00000554607 ZBTB7BO15156 539 aaPredicted RBP29.86■■■□□ 2.37
FOXA1-204ENST00000554607 GCLCP48506 637 aaPredicted RBP29.86■■■□□ 2.37
FOXA1-204ENST00000554607 DEFB118Q96PH6 123 aa29.86■■■□□ 2.37
FOXA1-204ENST00000554607 PAK6Q9NQU5 681 aaPredicted RBP29.86■■■□□ 2.37
FOXA1-204ENST00000554607 RAI14Q9P0K7 980 aa29.86■■■□□ 2.37
FOXA1-204ENST00000554607 TAOK2Q9UL54 1235 aa29.86■■■□□ 2.37
FOXA1-204ENST00000554607 COL2A1P02458 1487 aaPredicted RBP29.86■■■□□ 2.37
FOXA1-204ENST00000554607 PRO3102Q9H379 93 aa29.85■■■□□ 2.37
FOXA1-204ENST00000554607 FAM196BA6NMK8 535 aa29.84■■■□□ 2.37
FOXA1-204ENST00000554607 EVI5O60447 810 aa29.84■■■□□ 2.37
FOXA1-204ENST00000554607 CAP2P40123 477 aa29.84■■■□□ 2.37
FOXA1-204ENST00000554607 TBC1D9Q6ZT07 1266 aa29.84■■■□□ 2.37
FOXA1-204ENST00000554607 ARID4AP29374 1257 aaPredicted RBP29.83■■■□□ 2.37
FOXA1-204ENST00000554607 NOL10Q9BSC4 688 aaKnown RBP29.83■■■□□ 2.37
FOXA1-204ENST00000554607 CRISPLD2Q9H0B8 497 aa29.83■■■□□ 2.37
FOXA1-204ENST00000554607 AS3MTQ9HBK9 375 aa29.83■■■□□ 2.37
FOXA1-204ENST00000554607 HERC5Q9UII4 1024 aaKnown RBP29.83■■■□□ 2.37
FOXA1-204ENST00000554607 USP17L5A8MUK1 530 aa29.82■■■□□ 2.36
FOXA1-204ENST00000554607 IPO8O15397 1037 aaKnown RBP29.82■■■□□ 2.36
FOXA1-204ENST00000554607 UQCRFS1P1P0C7P4 283 aa29.82■■■□□ 2.36
FOXA1-204ENST00000554607 G3BP1Q13283 466 aaKnown RBP eCLIP29.82■■■□□ 2.36
FOXA1-204ENST00000554607 TEX11Q8IYF3 940 aa29.82■■■□□ 2.36
FOXA1-204ENST00000554607 LRP2BPQ9P2M1 347 aa29.82■■■□□ 2.36
FOXA1-204ENST00000554607 GNAI2P04899 355 aa29.81■■■□□ 2.36
FOXA1-204ENST00000554607 HMGCS2P54868 508 aa29.81■■■□□ 2.36
FOXA1-204ENST00000554607 PI16Q6UXB8 463 aa29.81■■■□□ 2.36
FOXA1-204ENST00000554607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.81■■■□□ 2.36
FOXA1-204ENST00000554607 DOCK3Q8IZD9 2030 aa29.81■■■□□ 2.36
FOXA1-204ENST00000554607 A0A1W2PPC1 479 aa29.8■■■□□ 2.36
FOXA1-204ENST00000554607 SH3D19Q5HYK7 790 aa29.8■■■□□ 2.36
FOXA1-204ENST00000554607 DHX36Q9H2U1 1008 aaKnown RBP29.8■■■□□ 2.36
FOXA1-204ENST00000554607 PI4KBQ9UBF8 816 aa29.8■■■□□ 2.36
FOXA1-204ENST00000554607 RANBP2P49792 3224 aaKnown RBP29.8■■■□□ 2.36
FOXA1-204ENST00000554607 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.79■■■□□ 2.362e-7■■□□□ 13.5
FOXA1-204ENST00000554607 SZT2Q5T011 3432 aa29.78■■■□□ 2.36
FOXA1-204ENST00000554607 BAG3O95817 575 aa29.78■■■□□ 2.36
FOXA1-204ENST00000554607 HMGCRP04035 888 aa29.78■■■□□ 2.36
FOXA1-204ENST00000554607 NECAB2Q7Z6G3 386 aa29.78■■■□□ 2.36
FOXA1-204ENST00000554607 ASCC2Q9H1I8 757 aaPredicted RBP29.78■■■□□ 2.36
FOXA1-204ENST00000554607 PLCG2P16885 1265 aa29.77■■■□□ 2.36
FOXA1-204ENST00000554607 MCAMP43121 646 aa29.77■■■□□ 2.36
FOXA1-204ENST00000554607 ANKLE1Q8NAG6 615 aa29.77■■■□□ 2.36
FOXA1-204ENST00000554607 PAWRQ96IZ0 340 aaKnown RBP29.77■■■□□ 2.36
FOXA1-204ENST00000554607 WDR18Q9BV38 432 aa29.77■■■□□ 2.36
FOXA1-204ENST00000554607 LOC285556D6RIA3 1793 aa29.77■■■□□ 2.36
FOXA1-204ENST00000554607 RRP1BQ14684 758 aaKnown RBP29.76■■■□□ 2.35
FOXA1-204ENST00000554607 SH3RF3Q8TEJ3 882 aaPredicted RBP29.76■■■□□ 2.35
FOXA1-204ENST00000554607 GJD2Q9UKL4 321 aa29.76■■■□□ 2.35
FOXA1-204ENST00000554607 NAA16Q6N069 864 aaPredicted RBP29.75■■■□□ 2.35
FOXA1-204ENST00000554607 TMOD4Q9NZQ9 345 aa29.75■■■□□ 2.35
FOXA1-204ENST00000554607 MORF4L1Q9UBU8 362 aa29.75■■■□□ 2.35
FOXA1-204ENST00000554607 RPTORQ8N122 1335 aa29.74■■■□□ 2.35
FOXA1-204ENST00000554607 ATAD5Q96QE3 1844 aa29.74■■■□□ 2.35
FOXA1-204ENST00000554607 ASNSP08243 561 aa29.74■■■□□ 2.35
FOXA1-204ENST00000554607 HMX1Q9NP08 348 aaPredicted RBP29.74■■■□□ 2.35
FOXA1-204ENST00000554607 PNMA6EA0A0J9YXQ4 647 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 IGSF3O75054 1194 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 TRIM27P14373 513 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 BACE1P56817 501 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 IRX3P78415 501 aaPredicted RBP29.73■■■□□ 2.35
FOXA1-204ENST00000554607 CCDC158Q5M9N0 1113 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 ATF7IPQ6VMQ6 1270 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 FOXP4Q8IVH2 680 aaPredicted RBP29.73■■■□□ 2.35
FOXA1-204ENST00000554607 GPR108Q9NPR9 543 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 GINM1Q9NU53 330 aa29.73■■■□□ 2.35
FOXA1-204ENST00000554607 AATFQ9NY61 560 aaKnown RBP eCLIP29.73■■■□□ 2.35
FOXA1-204ENST00000554607 HOXA7P31268 230 aaPredicted RBP29.72■■■□□ 2.35
FOXA1-204ENST00000554607 PPP4CP60510 307 aa29.72■■■□□ 2.35
FOXA1-204ENST00000554607 TTC39AQ5SRH9 613 aa29.72■■■□□ 2.35
FOXA1-204ENST00000554607 TRIM34Q9BYJ4 488 aa29.72■■■□□ 2.35
FOXA1-204ENST00000554607 C19orf81C9J6K1 198 aa29.71■■■□□ 2.35
FOXA1-204ENST00000554607 MTMR2Q13614 643 aa29.71■■■□□ 2.35
FOXA1-204ENST00000554607 STAP2Q9UGK3 403 aa29.71■■■□□ 2.35
FOXA1-204ENST00000554607 CRACR2BQ8N4Y2 399 aaPredicted RBP29.7■■■□□ 2.35
FOXA1-204ENST00000554607 DIS3LQ8TF46 1054 aaKnown RBP29.7■■■□□ 2.35
FOXA1-204ENST00000554607 TGFBRAP1Q8WUH2 860 aa29.7■■■□□ 2.35
FOXA1-204ENST00000554607 FRAT1Q92837 279 aaPredicted RBP29.7■■■□□ 2.35
FOXA1-204ENST00000554607 SNRKQ9NRH2 765 aa29.7■■■□□ 2.35
FOXA1-204ENST00000554607 METTL16Q86W50 562 aaKnown RBP29.69■■■□□ 2.34
FOXA1-204ENST00000554607 GPRC5AQ8NFJ5 357 aa29.69■■■□□ 2.34
FOXA1-204ENST00000554607 NBPF3Q9H094 633 aa29.69■■■□□ 2.34
FOXA1-204ENST00000554607 TNNI3KQ59H18 835 aa29.68■■■□□ 2.34
FOXA1-204ENST00000554607 MAPKAPK5Q8IW41 473 aa29.68■■■□□ 2.34
FOXA1-204ENST00000554607 P2RX7Q99572 595 aaKnown RBP29.68■■■□□ 2.34
FOXA1-204ENST00000554607 NUDT12Q9BQG2 462 aa29.68■■■□□ 2.34
FOXA1-204ENST00000554607 FPGT-TNNI3KV9GXZ4 949 aa29.68■■■□□ 2.34
FOXA1-204ENST00000554607 USP17L10C9JJH3 530 aa29.67■■■□□ 2.34
FOXA1-204ENST00000554607 OS9Q13438 667 aaPredicted RBP29.67■■■□□ 2.34
FOXA1-204ENST00000554607 SOCS4Q8WXH5 440 aa29.67■■■□□ 2.34
FOXA1-204ENST00000554607 FLT1P17948 1338 aa29.67■■■□□ 2.34
FOXA1-204ENST00000554607 XRCC5P13010 732 aaKnown RBP29.66■■■□□ 2.34
FOXA1-204ENST00000554607 CYP2B6P20813 491 aa29.66■■■□□ 2.34
FOXA1-204ENST00000554607 HERVK_113P62684 666 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms