RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	UBE2Q1	Q7Z7E8	422 aa		32.69	■■■□□ 2.82
KTN1-215	ENST00000554567	CLUAP1	Q96AJ1	413 aa		32.69	■■■□□ 2.82
KTN1-215	ENST00000554567	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.69	■■■□□ 2.82
KTN1-215	ENST00000554567	LRP2BP	Q9P2M1	347 aa		32.69	■■■□□ 2.82
KTN1-215	ENST00000554567	FARP2	O94887	1054 aa	Predicted RBP	32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	SGPL1	O95470	568 aa		32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	TRIM27	P14373	513 aa		32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	ARID4A	P29374	1257 aa	Predicted RBP	32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	COA7	Q96BR5	231 aa		32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	PNMA3	Q9UL41	463 aa		32.68	■■■□□ 2.82
KTN1-215	ENST00000554567	MCAM	P43121	646 aa		32.67	■■■□□ 2.82
KTN1-215	ENST00000554567	TEX11	Q8IYF3	940 aa		32.67	■■■□□ 2.82
KTN1-215	ENST00000554567	PXYLP1	Q8TE99	480 aa		32.67	■■■□□ 2.82
KTN1-215	ENST00000554567	BCAR3	O75815	825 aa		32.66	■■■□□ 2.82
KTN1-215	ENST00000554567	MAP4K4	O95819	1239 aa	Predicted RBP	32.66	■■■□□ 2.82
KTN1-215	ENST00000554567	TFRC	P02786	760 aa	Known RBP	32.66	■■■□□ 2.82
KTN1-215	ENST00000554567	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.66	■■■□□ 2.82
KTN1-215	ENST00000554567	ZNF280C	Q8ND82	737 aa		32.66	■■■□□ 2.82
KTN1-215	ENST00000554567	UQCRFS1P1	P0C7P4	283 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	CAP2	P40123	477 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	HMGCS2	P54868	508 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	IRF5	Q13568	498 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	ATF7IP	Q6VMQ6	1270 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	DEFB118	Q96PH6	123 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	NOL10	Q9BSC4	688 aa	Known RBP	32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	SNRK	Q9NRH2	765 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	RBM27	Q9P2N5	1060 aa	Known RBP	32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	TRIOBP	Q9H2D6	2365 aa		32.65	■■■□□ 2.82
KTN1-215	ENST00000554567	RRP1B	Q14684	758 aa	Known RBP	32.64	■■■□□ 2.82
KTN1-215	ENST00000554567	FAM110C	Q1W6H9	321 aa		32.63	■■■□□ 2.81
KTN1-215	ENST00000554567	NR2E3	Q9Y5X4	410 aa		32.63	■■■□□ 2.81
KTN1-215	ENST00000554567	USP17L5	A8MUK1	530 aa		32.62	■■■□□ 2.81
KTN1-215	ENST00000554567	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
KTN1-215	ENST00000554567	TTC39A	Q5SRH9	613 aa		32.61	■■■□□ 2.81
KTN1-215	ENST00000554567	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
KTN1-215	ENST00000554567	DOCK3	Q8IZD9	2030 aa		32.61	■■■□□ 2.81
KTN1-215	ENST00000554567	NAA16	Q6N069	864 aa	Predicted RBP	32.6	■■■□□ 2.81
KTN1-215	ENST00000554567	TBC1D2	Q9BYX2	928 aa		32.6	■■■□□ 2.81
KTN1-215	ENST00000554567	HERC5	Q9UII4	1024 aa	Known RBP	32.6	■■■□□ 2.81
KTN1-215	ENST00000554567	COL2A1	P02458	1487 aa	Predicted RBP	32.6	■■■□□ 2.81
KTN1-215	ENST00000554567	ATAD5	Q96QE3	1844 aa		32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	CCER2	I3L3R5	266 aa		32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	BAG3	O95817	575 aa		32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	GCLC	P48506	637 aa	Predicted RBP	32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	OS9	Q13438	667 aa	Predicted RBP	32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	AS3MT	Q9HBK9	375 aa		32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	PI4KB	Q9UBF8	816 aa		32.59	■■■□□ 2.81
KTN1-215	ENST00000554567	CCDC158	Q5M9N0	1113 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	MAPKAPK5	Q8IW41	473 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	TMEM57	Q8N5G2	664 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	TGFBRAP1	Q8WUH2	860 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	DBNDD2	Q9BQY9	259 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	PAK6	Q9NQU5	681 aa	Predicted RBP	32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	SZT2	Q5T011	3432 aa		32.57	■■■□□ 2.8
KTN1-215	ENST00000554567	ZBTB7B	O15156	539 aa	Predicted RBP	32.56	■■■□□ 2.8
KTN1-215	ENST00000554567	EVI5	O60447	810 aa		32.56	■■■□□ 2.8
KTN1-215	ENST00000554567	TNNI3K	Q59H18	835 aa		32.56	■■■□□ 2.8
KTN1-215	ENST00000554567	DHX36	Q9H2U1	1008 aa	Known RBP	32.56	■■■□□ 2.8
KTN1-215	ENST00000554567	FPGT-TNNI3K	V9GXZ4	949 aa		32.56	■■■□□ 2.8
KTN1-215	ENST00000554567	PLCG2	P16885	1265 aa		32.55	■■■□□ 2.8
KTN1-215	ENST00000554567	MTMR2	Q13614	643 aa		32.55	■■■□□ 2.8
KTN1-215	ENST00000554567	SH3D19	Q5HYK7	790 aa		32.55	■■■□□ 2.8
KTN1-215	ENST00000554567	LOC285556	D6RIA3	1793 aa		32.55	■■■□□ 2.8
KTN1-215	ENST00000554567	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.54	■■■□□ 2.8
KTN1-215	ENST00000554567	PAWR	Q96IZ0	340 aa	Known RBP	32.54	■■■□□ 2.8
KTN1-215	ENST00000554567	TRIM34	Q9BYJ4	488 aa		32.54	■■■□□ 2.8
KTN1-215	ENST00000554567	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	32.54	■■■□□ 2.8	1e-8	■■■■■ 33.9
KTN1-215	ENST00000554567	CYP2E1	P05181	493 aa	Predicted RBP	32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	IRX3	P78415	501 aa	Predicted RBP	32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	POLA2	Q14181	598 aa		32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	ADGRA1	Q86SQ6	560 aa		32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	GPR108	Q9NPR9	543 aa		32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	TMOD4	Q9NZQ9	345 aa		32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	PALD1	Q9ULE6	856 aa		32.53	■■■□□ 2.8
KTN1-215	ENST00000554567	SURF6	O75683	361 aa	Known RBP	32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	JAG1	P78504	1218 aa		32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	ZKSCAN2	Q63HK3	967 aa		32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	WDR18	Q9BV38	432 aa		32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	CRISPLD2	Q9H0B8	497 aa		32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	GJD2	Q9UKL4	321 aa		32.52	■■■□□ 2.8
KTN1-215	ENST00000554567	HMGCR	P04035	888 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	ASNS	P08243	561 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	CAPN2	P17655	700 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	BACE1	P56817	501 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	PPP4C	P60510	307 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	SHROOM1	Q2M3G4	852 aa	Predicted RBP	32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	C1orf115	Q9H7X2	142 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	SAP30BP	Q9UHR5	308 aa	Known RBP	32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	FLT1	P17948	1338 aa		32.51	■■■□□ 2.79
KTN1-215	ENST00000554567	PEX10	O60683	326 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	GDF11	O95390	407 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	ZAP70	P43403	619 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	ATP8B2	P98198	1209 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	TRIM32	Q13049	653 aa		32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	DIS3L	Q8TF46	1054 aa	Known RBP	32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	P2RX7	Q99572	595 aa	Known RBP	32.5	■■■□□ 2.79
KTN1-215	ENST00000554567	PRO3102	Q9H379	93 aa		32.5	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms