RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.84■■□□□ 1.89
RCCD1-202ENST00000554302 SNRKQ9NRH2 765 aa26.84■■□□□ 1.89
RCCD1-202ENST00000554302 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.84■■□□□ 1.89
RCCD1-202ENST00000554302 HOXD10P28358 340 aa26.83■■□□□ 1.89
RCCD1-202ENST00000554302 PPP4CP60510 307 aa26.83■■□□□ 1.89
RCCD1-202ENST00000554302 OS9Q13438 667 aaPredicted RBP26.83■■□□□ 1.89
RCCD1-202ENST00000554302 TEX11Q8IYF3 940 aa26.83■■□□□ 1.89
RCCD1-202ENST00000554302 SH3RF3Q8TEJ3 882 aaPredicted RBP26.83■■□□□ 1.89
RCCD1-202ENST00000554302 ZBED9Q6R2W3 1325 aa26.83■■□□□ 1.89
RCCD1-202ENST00000554302 FAM196BA6NMK8 535 aa26.82■■□□□ 1.88
RCCD1-202ENST00000554302 FMNL1O95466 1100 aaPredicted RBP26.82■■□□□ 1.88
RCCD1-202ENST00000554302 NAA16Q6N069 864 aaPredicted RBP26.82■■□□□ 1.88
RCCD1-202ENST00000554302 GADL1Q6ZQY3 521 aa26.82■■□□□ 1.88
RCCD1-202ENST00000554302 CCDC84Q86UT8 332 aaPredicted RBP26.82■■□□□ 1.88
RCCD1-202ENST00000554302 DBNLQ9UJU6 430 aaKnown RBP26.82■■□□□ 1.88
RCCD1-202ENST00000554302 TRIM75PA6NK02 468 aa26.81■■□□□ 1.88
RCCD1-202ENST00000554302 ECM2O94769 699 aaPredicted RBP26.81■■□□□ 1.88
RCCD1-202ENST00000554302 RRP1BQ14684 758 aaKnown RBP26.81■■□□□ 1.88
RCCD1-202ENST00000554302 SLC4A8Q2Y0W8 1093 aa26.81■■□□□ 1.88
RCCD1-202ENST00000554302 HERC5Q9UII4 1024 aaKnown RBP26.81■■□□□ 1.88
RCCD1-202ENST00000554302 BAG3O95817 575 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 CAP2P40123 477 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 CEP85Q6P2H3 762 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 ADGRA1Q86SQ6 560 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 AATFQ9NY61 560 aaKnown RBP eCLIP26.8■■□□□ 1.88
RCCD1-202ENST00000554302 AGTPBP1Q9UPW5 1226 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 SIPA1L1O43166 1804 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 MYPNQ86TC9 1320 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 MGAMO43451 1857 aa26.8■■□□□ 1.88
RCCD1-202ENST00000554302 PLCG2P16885 1265 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 ZAP70P43403 619 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 FCGRTP55899 365 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 EAF2Q96CJ1 260 aaPredicted RBP26.79■■□□□ 1.88
RCCD1-202ENST00000554302 NOL10Q9BSC4 688 aaKnown RBP26.79■■□□□ 1.88
RCCD1-202ENST00000554302 TBC1D2Q9BYX2 928 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 DHX36Q9H2U1 1008 aaKnown RBP26.79■■□□□ 1.88
RCCD1-202ENST00000554302 TLR7Q9NYK1 1049 aaKnown RBP26.79■■□□□ 1.88
RCCD1-202ENST00000554302 PI4KBQ9UBF8 816 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 ATAD5Q96QE3 1844 aa26.79■■□□□ 1.88
RCCD1-202ENST00000554302 MYO5AQ9Y4I1 1855 aaKnown RBP26.79■■□□□ 1.88
RCCD1-202ENST00000554302 METTL16Q86W50 562 aaKnown RBP26.78■■□□□ 1.88
RCCD1-202ENST00000554302 PROCA1Q8NCQ7 364 aaPredicted RBP26.78■■□□□ 1.88
RCCD1-202ENST00000554302 LOC285556D6RIA3 1793 aa26.78■■□□□ 1.88
RCCD1-202ENST00000554302 FOCADQ5VW36 1801 aa26.78■■□□□ 1.88
RCCD1-202ENST00000554302 CDK5RAP2Q96SN8 1893 aa26.78■■□□□ 1.88
RCCD1-202ENST00000554302 MYCP01106 439 aaPredicted RBP26.77■■□□□ 1.88
RCCD1-202ENST00000554302 GRK4P32298 578 aa26.77■■□□□ 1.88
RCCD1-202ENST00000554302 PRKCZQ05513 592 aa26.77■■□□□ 1.88
RCCD1-202ENST00000554302 MTFR1Q15390 333 aa26.77■■□□□ 1.88
RCCD1-202ENST00000554302 ZNF280CQ8ND82 737 aa26.77■■□□□ 1.88
RCCD1-202ENST00000554302 RAET1EQ8TD07 263 aa26.77■■□□□ 1.88
RCCD1-202ENST00000554302 CCDC8Q9H0W5 538 aaPredicted RBP26.77■■□□□ 1.88
RCCD1-202ENST00000554302 PIH1D3Q9NQM4 214 aaKnown RBP26.77■■□□□ 1.88
RCCD1-202ENST00000554302 FLT1P17948 1338 aa26.76■■□□□ 1.87
RCCD1-202ENST00000554302 SPP2Q13103 211 aa26.76■■□□□ 1.87
RCCD1-202ENST00000554302 TREML2Q5T2D2 321 aa26.76■■□□□ 1.87
RCCD1-202ENST00000554302 SH3D19Q5HYK7 790 aa26.75■■□□□ 1.87
RCCD1-202ENST00000554302 TGFBRAP1Q8WUH2 860 aa26.75■■□□□ 1.87
RCCD1-202ENST00000554302 USP17L5A8MUK1 530 aa26.74■■□□□ 1.87
RCCD1-202ENST00000554302 PANK1Q8TE04 598 aa26.74■■□□□ 1.87
RCCD1-202ENST00000554302 SMCR8Q8TEV9 937 aaPredicted RBP26.74■■□□□ 1.87
RCCD1-202ENST00000554302 GCC1Q96CN9 775 aa26.74■■□□□ 1.87
RCCD1-202ENST00000554302 DNAJC18Q9H819 358 aa26.74■■□□□ 1.87
RCCD1-202ENST00000554302 GABRQQ9UN88 632 aa26.74■■□□□ 1.87
RCCD1-202ENST00000554302 FOXP4Q8IVH2 680 aaPredicted RBP26.73■■□□□ 1.87
RCCD1-202ENST00000554302 MAPKAPK5Q8IW41 473 aa26.73■■□□□ 1.87
RCCD1-202ENST00000554302 SHISA4Q96DD7 197 aa26.73■■□□□ 1.87
RCCD1-202ENST00000554302 PNMA3Q9UL41 463 aa26.73■■□□□ 1.87
RCCD1-202ENST00000554302 SLAIN1Q8ND83 568 aa26.72■■□□□ 1.87
RCCD1-202ENST00000554302 WDR18Q9BV38 432 aa26.72■■□□□ 1.87
RCCD1-202ENST00000554302 HMGCS2P54868 508 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 JAG1P78504 1218 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 FAM110CQ1W6H9 321 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 ERC1Q8IUD2 1116 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 AS3MTQ9HBK9 375 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 EXOC6BQ9Y2D4 811 aa26.71■■□□□ 1.87
RCCD1-202ENST00000554302 GJB1P08034 283 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 CCL5P13501 91 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 CYP7A1P22680 504 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 FLT3LGP49771 235 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 DYNLL1P63167 89 aaKnown RBP26.7■■□□□ 1.86
RCCD1-202ENST00000554302 IRF5Q13568 498 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 PALD1Q9ULE6 856 aa26.7■■□□□ 1.86
RCCD1-202ENST00000554302 ASNSP08243 561 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 GJA8P48165 433 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 PABPC4Q13310 644 aaKnown RBP eCLIP26.69■■□□□ 1.86
RCCD1-202ENST00000554302 TMED8Q6PL24 325 aaPredicted RBP26.69■■□□□ 1.86
RCCD1-202ENST00000554302 ANKRD13CQ8N6S4 541 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 NKX2-3Q8TAU0 364 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 PXYLP1Q8TE99 480 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 GINM1Q9NU53 330 aa26.69■■□□□ 1.86
RCCD1-202ENST00000554302 TNPO2O14787 897 aaKnown RBP26.68■■□□□ 1.86
RCCD1-202ENST00000554302 GCLCP48506 637 aaPredicted RBP26.68■■□□□ 1.86
RCCD1-202ENST00000554302 BACE1P56817 501 aa26.68■■□□□ 1.86
RCCD1-202ENST00000554302 UBXN2AP68543 259 aa26.68■■□□□ 1.86
RCCD1-202ENST00000554302 CERS3Q8IU89 383 aa26.68■■□□□ 1.86
RCCD1-202ENST00000554302 ADCY3O60266 1144 aa26.67■■□□□ 1.86
RCCD1-202ENST00000554302 IDH1O75874 414 aaKnown RBP26.67■■□□□ 1.86
RCCD1-202ENST00000554302 MS4A1P11836 297 aa26.67■■□□□ 1.86
RCCD1-202ENST00000554302 UBE2Q1Q7Z7E8 422 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms