RNA–Protein interactions for RNA: ENST00000553920.5

RBM23-211, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-211	ENST00000553920	NKX2-3	Q8TAU0	364 aa		10.06	□□□□□ -0.8
RBM23-211	ENST00000553920	NSUN4	Q96CB9	384 aa	Known RBP	10.06	□□□□□ -0.8
RBM23-211	ENST00000553920	PKNOX2	Q96KN3	472 aa		10.06	□□□□□ -0.8
RBM23-211	ENST00000553920	BIN2	Q9UBW5	565 aa	Predicted RBP	10.06	□□□□□ -0.8
RBM23-211	ENST00000553920	GTF3C3	Q9Y5Q9	886 aa		10.06	□□□□□ -0.8
RBM23-211	ENST00000553920	INHA	P05111	366 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	UBXN2A	P68543	259 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	IRF5	Q13568	498 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	ANKRD13C	Q8N6S4	541 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	AGTPBP1	Q9UPW5	1226 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	LOC285556	D6RIA3	1793 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	ALPK3	Q96L96	1907 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	COL6A3	P12111	3177 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	PLXNB2	O15031	1838 aa		10.05	□□□□□ -0.8
RBM23-211	ENST00000553920	PNMA6E	A0A0J9YXQ4	647 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	TNPO2	O14787	897 aa	Known RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	FARP2	O94887	1054 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	ARID4A	P29374	1257 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	MCAM	P43121	646 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	JAG1	P78504	1218 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	SPP2	Q13103	211 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	MVP	Q14764	893 aa	Known RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	SLF2	Q8IX21	1173 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	SPATA5	Q8NB90	893 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	PXYLP1	Q8TE99	480 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	ARHGAP45	Q92619	1136 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	NEUROD6	Q96NK8	337 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	PAK6	Q9NQU5	681 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	AKAP2	Q9Y2D5	859 aa		10.04	□□□□□ -0.8
RBM23-211	ENST00000553920	ZBTB7B	O15156	539 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	PEX10	O60683	326 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	GNAI3	P08754	354 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	DEFB118	Q96PH6	123 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	CDK5RAP2	Q96SN8	1893 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	HTATIP2	Q9BUP3	242 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	CRISPLD2	Q9H0B8	497 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	GJD2	Q9UKL4	321 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	HDAC5	Q9UQL6	1122 aa		10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	COL2A1	P02458	1487 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM23-211	ENST00000553920	BCAR3	O75815	825 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	TFRC	P02786	760 aa	Known RBP	10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	TRIM27	P14373	513 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	CAP2	P40123	477 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	HMGCS2	P54868	508 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	TRIM32	Q13049	653 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	FAM110C	Q1W6H9	321 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	SH3D19	Q5HYK7	790 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	ADGRA1	Q86SQ6	560 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	HOMEZ	Q8IX15	550 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	ZNF280C	Q8ND82	737 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	DIS3L	Q8TF46	1054 aa	Known RBP	10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	DNAJC18	Q9H819	358 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	RAI14	Q9P0K7	980 aa		10.02	□□□□□ -0.81
RBM23-211	ENST00000553920	FOCAD	Q5VW36	1801 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	MAP4K4	O95819	1239 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	LDHC	P07864	332 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	MNX1	P50219	401 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	POTEE	Q6S8J3	1075 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	TEX11	Q8IYF3	940 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	PAWR	Q96IZ0	340 aa	Known RBP	10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	SNRK	Q9NRH2	765 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	TAOK2	Q9UL54	1235 aa		10.01	□□□□□ -0.81
RBM23-211	ENST00000553920	DNAH12	Q6ZR08	3092 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	USP17L5	A8MUK1	530 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	SOX1	O00570	391 aa	Predicted RBP	10	□□□□□ -0.81
RBM23-211	ENST00000553920	GNAI2	P04899	355 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	GSTO1	P78417	241 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	POLA2	Q14181	598 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	GORAB	Q5T7V8	394 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	ATF7IP	Q6VMQ6	1270 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	METTL16	Q86W50	562 aa	Known RBP	10	□□□□□ -0.81
RBM23-211	ENST00000553920	CLUAP1	Q96AJ1	413 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	COA7	Q96BR5	231 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10	□□□□□ -0.81
RBM23-211	ENST00000553920	TXNRD2	Q9NNW7	524 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	AATF	Q9NY61	560 aa	Known RBP eCLIP	10	□□□□□ -0.81
RBM23-211	ENST00000553920	LRP2BP	Q9P2M1	347 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	STAP2	Q9UGK3	403 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	PNMA3	Q9UL41	463 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	NR2E3	Q9Y5X4	410 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	MAST2	Q6P0Q8	1798 aa		10	□□□□□ -0.81
RBM23-211	ENST00000553920	EVI5	O60447	810 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	CYP2E1	P05181	493 aa	Predicted RBP	9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	GCLC	P48506	637 aa	Predicted RBP	9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	PPP4C	P60510	307 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	MTMR2	Q13614	643 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	TNNI3K	Q59H18	835 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	MAPKAPK5	Q8IW41	473 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	TMEM57	Q8N5G2	664 aa		9.99	□□□□□ -0.81
RBM23-211	ENST00000553920	TGFBRAP1	Q8WUH2	860 aa		9.99	□□□□□ -0.81

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