RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
SIX1-202ENST00000553535 MGAMO43451 1857 aa15.27■□□□□ 0.04
SIX1-202ENST00000553535 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 FMNL1O95466 1100 aaPredicted RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 RLBP1P12271 317 aa15.27■□□□□ 0.03
SIX1-202ENST00000553535 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.03
SIX1-202ENST00000553535 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.03
SIX1-202ENST00000553535 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.03
SIX1-202ENST00000553535 SNRKQ9NRH2 765 aa15.27■□□□□ 0.03
SIX1-202ENST00000553535 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.03
SIX1-202ENST00000553535 CEP290O15078 2479 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 MYCP01106 439 aaPredicted RBP15.26■□□□□ 0.03
SIX1-202ENST00000553535 CCDC158Q5M9N0 1113 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
SIX1-202ENST00000553535 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
SIX1-202ENST00000553535 C1orf115Q9H7X2 142 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 MYO5AQ9Y4I1 1855 aaKnown RBP15.26■□□□□ 0.03
SIX1-202ENST00000553535 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
SIX1-202ENST00000553535 PPP4CP60510 307 aa15.25■□□□□ 0.03
SIX1-202ENST00000553535 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
SIX1-202ENST00000553535 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
SIX1-202ENST00000553535 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
SIX1-202ENST00000553535 TEX11Q8IYF3 940 aa15.25■□□□□ 0.03
SIX1-202ENST00000553535 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
SIX1-202ENST00000553535 MYPNQ86TC9 1320 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 GABBR2O75899 941 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
SIX1-202ENST00000553535 GRK4P32298 578 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 MTFR1Q15390 333 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
SIX1-202ENST00000553535 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
SIX1-202ENST00000553535 IGSF3O75054 1194 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 CAP2P40123 477 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 FCGRTP55899 365 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 RAET1EQ8TD07 263 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
SIX1-202ENST00000553535 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 ATAD5Q96QE3 1844 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 BAG3O95817 575 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 ZAP70P43403 619 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 PRKCZQ05513 592 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 SPP2Q13103 211 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
SIX1-202ENST00000553535 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
SIX1-202ENST00000553535 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
SIX1-202ENST00000553535 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
SIX1-202ENST00000553535 GABRQQ9UN88 632 aa15.23■□□□□ 0.03
SIX1-202ENST00000553535 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
SIX1-202ENST00000553535 PLCG2P16885 1265 aa15.22■□□□□ 0.03
SIX1-202ENST00000553535 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
SIX1-202ENST00000553535 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
SIX1-202ENST00000553535 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
SIX1-202ENST00000553535 EAF2Q96CJ1 260 aaPredicted RBP15.22■□□□□ 0.03
SIX1-202ENST00000553535 TBC1D2Q9BYX2 928 aa15.22■□□□□ 0.03
SIX1-202ENST00000553535 CCDC8Q9H0W5 538 aaPredicted RBP15.22■□□□□ 0.03
SIX1-202ENST00000553535 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
SIX1-202ENST00000553535 DIEXFQ68CQ4 756 aaKnown RBP15.21■□□□□ 0.03
SIX1-202ENST00000553535 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
SIX1-202ENST00000553535 TGFBRAP1Q8WUH2 860 aa15.21■□□□□ 0.03
SIX1-202ENST00000553535 PIH1D3Q9NQM4 214 aaKnown RBP15.21■□□□□ 0.03
SIX1-202ENST00000553535 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
SIX1-202ENST00000553535 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
SIX1-202ENST00000553535 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.02
SIX1-202ENST00000553535 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
SIX1-202ENST00000553535 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
SIX1-202ENST00000553535 CEP85Q6P2H3 762 aa15.2■□□□□ 0.02
SIX1-202ENST00000553535 FOXP4Q8IVH2 680 aaPredicted RBP15.2■□□□□ 0.02
SIX1-202ENST00000553535 SMCR8Q8TEV9 937 aaPredicted RBP15.2■□□□□ 0.02
SIX1-202ENST00000553535 SHISA4Q96DD7 197 aa15.2■□□□□ 0.02
SIX1-202ENST00000553535 GJB1P08034 283 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 CCL5P13501 91 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 FLT3LGP49771 235 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 JAG1P78504 1218 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 MAPKAPK5Q8IW41 473 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 LOC285556D6RIA3 1793 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 FLT1P17948 1338 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 GJA8P48165 433 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 HMGCS2P54868 508 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 UBXN2AP68543 259 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 IRF5Q13568 498 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
SIX1-202ENST00000553535 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 NKX2-3Q8TAU0 364 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
SIX1-202ENST00000553535 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms