RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 WTAPQ15007 396 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 ME3Q16798 604 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 GMLQ99445 158 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 LRRC2Q9BYS8 371 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 OSBPL5Q9H0X9 879 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-206ENST00000552608 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 FZD9O00144 591 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 PFKFB2O60825 505 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 ENTPD3O75355 529 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 WDHD1O75717 1129 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-206ENST00000552608 EVCP57679 992 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 APOBRQ0VD83 1088 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 DPF2Q92785 391 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
LINC00661-206ENST00000552608 KLF18A0A0U1RQI7 1052 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 CYP2D6P10635 497 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 STK3Q13188 491 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
LINC00661-206ENST00000552608 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
LINC00661-206ENST00000552608 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
LINC00661-206ENST00000552608 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
LINC00661-206ENST00000552608 LLPHQ9BRT6 129 aaKnown RBP12.84□□□□□ -0.35
LINC00661-206ENST00000552608 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
LINC00661-206ENST00000552608 PRDM1O75626 825 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 LARGE1O95461 756 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 RCAN1P53805 252 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
LINC00661-206ENST00000552608 SGMS1Q86VZ5 419 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 IGDCC4Q8TDY8 1250 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
LINC00661-206ENST00000552608 EHD4Q9H223 541 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
LINC00661-206ENST00000552608 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 GJA3Q9Y6H8 435 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 TNKSO95271 1327 aa12.83□□□□□ -0.36
LINC00661-206ENST00000552608 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 ZBTB43O43298 467 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 CDKL5O76039 1030 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 PDCP20941 246 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 DDIT3P35638 169 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 TNNI2P48788 182 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 CDK8P49336 464 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 PLCD1P51178 756 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 HMGN5P82970 282 aaKnown RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
LINC00661-206ENST00000552608 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
LINC00661-206ENST00000552608 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 H7C1D1 291 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 CPLX1O14810 134 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 CALM1P0DP23 149 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 CALM2P0DP24 149 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 CALM3P0DP25 149 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 GJB2P29033 226 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-206ENST00000552608 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00661-206ENST00000552608 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-206ENST00000552608 TFAP4Q01664 338 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 FOXP4Q8IVH2 680 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-206ENST00000552608 GPC2Q8N158 579 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 FAM184AQ8NB25 1140 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms