RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
HCFC2-206ENST00000552343 VTI1BQ9UEU0 232 aa6.7□□□□□ -1.34
HCFC2-206ENST00000552343 NCANO14594 1321 aa6.7□□□□□ -1.34
HCFC2-206ENST00000552343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
HCFC2-206ENST00000552343 PRRG2O14669 202 aa6.69□□□□□ -1.34
HCFC2-206ENST00000552343 TSPAN15O95858 294 aa6.69□□□□□ -1.34
HCFC2-206ENST00000552343 ORC1Q13415 861 aa6.69□□□□□ -1.34
HCFC2-206ENST00000552343 SMYD4Q8IYR2 804 aaPredicted RBP6.69□□□□□ -1.34
HCFC2-206ENST00000552343 ZSCAN18Q8TBC5 510 aaPredicted RBP6.69□□□□□ -1.34
HCFC2-206ENST00000552343 LIN37Q96GY3 246 aaPredicted RBP6.69□□□□□ -1.34
HCFC2-206ENST00000552343 DUSP23Q9BVJ7 150 aa6.69□□□□□ -1.34
HCFC2-206ENST00000552343 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
HCFC2-206ENST00000552343 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 TCF3P15923 654 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 EIF4BP23588 611 aaKnown RBP6.68□□□□□ -1.34
HCFC2-206ENST00000552343 ITPKAP23677 461 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 DAB2P98082 770 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 ID3Q02535 119 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 AP3B2Q13367 1082 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 DISC1Q9NRI5 854 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 TRAK1Q9UPV9 953 aa6.68□□□□□ -1.34
HCFC2-206ENST00000552343 B8ZZF3 427 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
HCFC2-206ENST00000552343 GADD45BO75293 160 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-206ENST00000552343 SLFN14P0C7P3 912 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 ZSCAN22P10073 491 aaPredicted RBP6.67□□□□□ -1.34
HCFC2-206ENST00000552343 ITIH2P19823 946 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 TTLL4Q14679 1199 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 SIAH1Q8IUQ4 282 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 CCDC74AQ96AQ1 378 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 ZC3H12CQ9C0D7 883 aaKnown RBP6.67□□□□□ -1.34
HCFC2-206ENST00000552343 TNKS2Q9H2K2 1166 aa6.67□□□□□ -1.34
HCFC2-206ENST00000552343 ZNF862O60290 1169 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 RNGTTO60942 597 aaKnown RBP6.66□□□□□ -1.34
HCFC2-206ENST00000552343 HCLS1P14317 486 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-206ENST00000552343 KIAA0319Q5VV43 1072 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 FYB2Q5VWT5 728 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-206ENST00000552343 ANKLE2Q86XL3 938 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 LMCD1Q9NZU5 365 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-206ENST00000552343 CTNND2Q9UQB3 1225 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 SNX11Q9Y5W9 270 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 AK5Q9Y6K8 562 aa6.66□□□□□ -1.34
HCFC2-206ENST00000552343 BUD31P41223 144 aaPredicted RBP6.65□□□□□ -1.34
HCFC2-206ENST00000552343 MRPL58Q14197 206 aaKnown RBP6.65□□□□□ -1.34
HCFC2-206ENST00000552343 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 PRR23BQ6ZRT6 265 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 CRELD1Q96HD1 420 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 METTL5Q9NRN9 209 aaKnown RBP6.65□□□□□ -1.34
HCFC2-206ENST00000552343 FAM8A1Q9UBU6 413 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.34
HCFC2-206ENST00000552343 XRCC5P13010 732 aaKnown RBP6.64□□□□□ -1.35
HCFC2-206ENST00000552343 ZP2Q05996 745 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 IKZF1Q13422 519 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 KIF4BQ2VIQ3 1234 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
HCFC2-206ENST00000552343 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 TMEM87AQ8NBN3 555 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 HEXIM2Q96MH2 286 aaKnown RBP6.64□□□□□ -1.35
HCFC2-206ENST00000552343 EHD4Q9H223 541 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 C12orf49Q9H741 205 aa6.64□□□□□ -1.35
HCFC2-206ENST00000552343 NEFMP07197 916 aa6.63□□□□□ -1.35
HCFC2-206ENST00000552343 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
HCFC2-206ENST00000552343 GSTT1P30711 240 aa6.63□□□□□ -1.35
HCFC2-206ENST00000552343 AFMP43652 599 aa6.63□□□□□ -1.35
HCFC2-206ENST00000552343 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
HCFC2-206ENST00000552343 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
HCFC2-206ENST00000552343 KRT1P04264 644 aa6.62□□□□□ -1.35
HCFC2-206ENST00000552343 TAGLNQ01995 201 aaKnown RBP6.62□□□□□ -1.35
HCFC2-206ENST00000552343 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
HCFC2-206ENST00000552343 FAM214BQ7L5A3 538 aa6.62□□□□□ -1.35
HCFC2-206ENST00000552343 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
HCFC2-206ENST00000552343 RECKO95980 971 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 GLI1P08151 1106 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 GSTP1P09211 210 aaKnown RBP6.61□□□□□ -1.35
HCFC2-206ENST00000552343 FAAP100Q0VG06 881 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 DIEXFQ68CQ4 756 aaKnown RBP6.61□□□□□ -1.35
HCFC2-206ENST00000552343 MPZL3Q6UWV2 235 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 SPACA3Q8IXA5 215 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 RNF34Q969K3 372 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 ISL2Q96A47 359 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 BACH2Q9BYV9 841 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 ABCB6Q9NP58 842 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
HCFC2-206ENST00000552343 KRT82Q9NSB4 513 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 RAPGEFL1Q9UHV5 662 aa6.61□□□□□ -1.35
HCFC2-206ENST00000552343 NISCHQ9Y2I1 1504 aa6.6□□□□□ -1.35
HCFC2-206ENST00000552343 ZNF76P36508 570 aa6.6□□□□□ -1.35
HCFC2-206ENST00000552343 RPS26P11Q5JNZ5 115 aaPredicted RBP6.6□□□□□ -1.35
HCFC2-206ENST00000552343 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
HCFC2-206ENST00000552343 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
HCFC2-206ENST00000552343 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms