RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FAM200AQ8TCP9 573 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 RBM17Q96I25 401 aaKnown RBP16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 ZSCAN10Q96SZ4 725 aaPredicted RBP16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
RAB3IP-216ENST00000552199 SPTLC2O15270 562 aa16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■□□□ 12.9
RAB3IP-216ENST00000552199 GPSM2P81274 684 aa16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 NBPF11Q86T75 865 aa16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 LAMB1P07942 1786 aa16.27■□□□□ 0.19
RAB3IP-216ENST00000552199 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 ADCY5O95622 1261 aa16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 ENAHQ8N8S7 591 aaPredicted RBP16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
RAB3IP-216ENST00000552199 UBE2Q2LH0YL09 131 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 ORC4O43929 436 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 GNL2Q13823 731 aaKnown RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 ANO6Q4KMQ2 910 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 NUP133Q8WUM0 1156 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 PRDM1O75626 825 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 BBOX1O75936 387 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 DDR1Q08345 913 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 SLC39A14Q15043 492 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 PROM2Q8N271 834 aa16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 ARPP21Q9UBL0 812 aaPredicted RBP16.25■□□□□ 0.19
RAB3IP-216ENST00000552199 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 DEXIO95424 95 aa16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 GSTO1P78417 241 aa16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 TXNRD1Q16881 649 aa16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 IFIT1BQ5T764 474 aaKnown RBP16.24■□□□□ 0.19
RAB3IP-216ENST00000552199 UFL1O94874 794 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 EVX2Q03828 476 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CBX8Q9HC52 389 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 GGA1Q9UJY5 639 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 KLRG2A4D1S0 409 aaPredicted RBP16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 AP5Z1O43299 807 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 MMP1P03956 469 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CYP2D6P10635 497 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 MYH6P13533 1939 aa16.23■□□□□ 0.19
RAB3IP-216ENST00000552199 CAVIN2O95810 425 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 NDUFA8P51970 172 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 SAFBQ15424 915 aaKnown RBP eCLIP16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 GRIK5Q16478 980 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 ZKSCAN5Q9Y2L8 839 aa16.22■□□□□ 0.19
RAB3IP-216ENST00000552199 PPP6R2O75170 966 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 LDHCP07864 332 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 CALM1P0DP23 149 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 CALM2P0DP24 149 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 CALM3P0DP25 149 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 IL1R1P14778 569 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 CMA1P23946 247 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 PPP4CP60510 307 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 PDE4BQ07343 736 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 PTPAQ15257 358 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 MAP3K14Q99558 947 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 MCM9Q9NXL9 1143 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 BAG3O95817 575 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 FUT2Q10981 343 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 TROAPQ12815 778 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 NOSTRINQ8IVI9 506 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 SH3RF3Q8TEJ3 882 aaPredicted RBP16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 KCNJ14Q9UNX9 436 aa16.21■□□□□ 0.19
RAB3IP-216ENST00000552199 BTBD18B2RXH4 712 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms