RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 OSBPL5Q9H0X9 879 aaPredicted RBP26.82■■□□□ 1.88
SMARCD1-212ENST00000551966 HMG20BQ9P0W2 317 aa26.82■■□□□ 1.88
SMARCD1-212ENST00000551966 HDAC5Q9UQL6 1122 aa26.82■■□□□ 1.88
SMARCD1-212ENST00000551966 PI16Q6UXB8 463 aa26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 TBC1D9Q6ZT07 1266 aa26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 DIS3LQ8TF46 1054 aaKnown RBP26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 NSUN4Q96CB9 384 aaKnown RBP26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 API5Q9BZZ5 524 aaKnown RBP26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 GJD2Q9UKL4 321 aa26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 AKAP2Q9Y2D5 859 aa26.81■■□□□ 1.88
SMARCD1-212ENST00000551966 A0A1W2PPC1 479 aa26.8■■□□□ 1.88
SMARCD1-212ENST00000551966 ZNF280CQ8ND82 737 aa26.8■■□□□ 1.88
SMARCD1-212ENST00000551966 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.8■■□□□ 1.88
SMARCD1-212ENST00000551966 PNMA3Q9UL41 463 aa26.8■■□□□ 1.88
SMARCD1-212ENST00000551966 MVPQ14764 893 aaKnown RBP26.79■■□□□ 1.88
SMARCD1-212ENST00000551966 LRCH3Q96II8 777 aa26.79■■□□□ 1.88
SMARCD1-212ENST00000551966 SRGAP3O43295 1099 aa26.78■■□□□ 1.88
SMARCD1-212ENST00000551966 CAP2P40123 477 aa26.78■■□□□ 1.88
SMARCD1-212ENST00000551966 HMGCS2P54868 508 aa26.78■■□□□ 1.88
SMARCD1-212ENST00000551966 TRIM32Q13049 653 aa26.78■■□□□ 1.88
SMARCD1-212ENST00000551966 NEUROD6Q96NK8 337 aa26.78■■□□□ 1.88
SMARCD1-212ENST00000551966 LDHCP07864 332 aa26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 GCLCP48506 637 aaPredicted RBP26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 NECAB2Q7Z6G3 386 aa26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 SPATA5Q8NB90 893 aa26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 ASCC2Q9H1I8 757 aaPredicted RBP26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 ALPK3Q96L96 1907 aa26.77■■□□□ 1.88
SMARCD1-212ENST00000551966 MAP4K4O95819 1239 aaPredicted RBP26.76■■□□□ 1.87
SMARCD1-212ENST00000551966 MNX1P50219 401 aaPredicted RBP26.76■■□□□ 1.87
SMARCD1-212ENST00000551966 MTX1Q13505 466 aa26.76■■□□□ 1.87
SMARCD1-212ENST00000551966 SH3D19Q5HYK7 790 aa26.76■■□□□ 1.87
SMARCD1-212ENST00000551966 USP17L5A8MUK1 530 aa26.75■■□□□ 1.87
SMARCD1-212ENST00000551966 CT47B1P0C2W7 299 aaPredicted RBP26.75■■□□□ 1.87
SMARCD1-212ENST00000551966 GDF15Q99988 308 aa26.75■■□□□ 1.87
SMARCD1-212ENST00000551966 COL2A1P02458 1487 aaPredicted RBP26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 LOC285556D6RIA3 1793 aa26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 HMGCRP04035 888 aa26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 GSTO1P78417 241 aa26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 TBC1D2Q9BYX2 928 aa26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 RAI14Q9P0K7 980 aa26.74■■□□□ 1.87
SMARCD1-212ENST00000551966 RPTORQ8N122 1335 aa26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 PEX10O60683 326 aa26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 ARID4AP29374 1257 aaPredicted RBP26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 JAG1P78504 1218 aa26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 PABPC4Q13310 644 aaKnown RBP eCLIP26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 ANKLE1Q8NAG6 615 aa26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 SLC17A8Q8NDX2 589 aa26.73■■□□□ 1.87
SMARCD1-212ENST00000551966 GNAI3P08754 354 aa26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 TEX11Q8IYF3 940 aa26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 SH3RF3Q8TEJ3 882 aaPredicted RBP26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 HMX1Q9NP08 348 aaPredicted RBP26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 MORF4L1Q9UBU8 362 aa26.72■■□□□ 1.87
SMARCD1-212ENST00000551966 BMP8BP34820 402 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 MCAMP43121 646 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 GORABQ5T7V8 394 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 C7orf61Q8IZ16 206 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 P2RX7Q99572 595 aaKnown RBP26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 WDR18Q9BV38 432 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 HERC5Q9UII4 1024 aaKnown RBP26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 ZMYND8Q9ULU4 1186 aaPredicted RBP26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 PLXNB2O15031 1838 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 ATAD5Q96QE3 1844 aa26.71■■□□□ 1.87
SMARCD1-212ENST00000551966 TRIB2Q92519 343 aa26.7■■□□□ 1.86
SMARCD1-212ENST00000551966 ARHGAP45Q92619 1136 aa26.7■■□□□ 1.86
SMARCD1-212ENST00000551966 NBPF3Q9H094 633 aa26.7■■□□□ 1.86
SMARCD1-212ENST00000551966 AS3MTQ9HBK9 375 aa26.69■■□□□ 1.86
SMARCD1-212ENST00000551966 TXNRD2Q9NNW7 524 aa26.69■■□□□ 1.86
SMARCD1-212ENST00000551966 PI4KBQ9UBF8 816 aa26.69■■□□□ 1.86
SMARCD1-212ENST00000551966 OGDHLQ9ULD0 1010 aa26.69■■□□□ 1.86
SMARCD1-212ENST00000551966 DLL1O00548 723 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 CYP2B6P20813 491 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 HOXA7P31268 230 aaPredicted RBP26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 BACE1P56817 501 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 MTMR2Q13614 643 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 SHROOM1Q2M3G4 852 aaPredicted RBP26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 DNAJC18Q9H819 358 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 LRP2BPQ9P2M1 347 aa26.68■■□□□ 1.86
SMARCD1-212ENST00000551966 PNMA6EA0A0J9YXQ4 647 aa26.67■■□□□ 1.86
SMARCD1-212ENST00000551966 MAP3K21Q5TCX8 1036 aa26.67■■□□□ 1.86
SMARCD1-212ENST00000551966 C11orf49Q9H6J7 331 aa26.67■■□□□ 1.86
SMARCD1-212ENST00000551966 SYN1P17600 705 aa26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 Q3C1V9 767 aa26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 METTL16Q86W50 562 aaKnown RBP26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 DHX36Q9H2U1 1008 aaKnown RBP26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 AATFQ9NY61 560 aaKnown RBP eCLIP26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 RBPJLQ9UBG7 517 aa26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 TNNQ9UQP3 1299 aa26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 SIPA1L1O43166 1804 aa26.66■■□□□ 1.86
SMARCD1-212ENST00000551966 UQCRFS1P1P0C7P4 283 aa26.65■■□□□ 1.86
SMARCD1-212ENST00000551966 G3BP1Q13283 466 aaKnown RBP eCLIP26.65■■□□□ 1.86
SMARCD1-212ENST00000551966 POTEEQ6S8J3 1075 aa26.65■■□□□ 1.86
SMARCD1-212ENST00000551966 ADGRA1Q86SQ6 560 aa26.65■■□□□ 1.86
SMARCD1-212ENST00000551966 SNRKQ9NRH2 765 aa26.65■■□□□ 1.86
SMARCD1-212ENST00000551966 PPP4CP60510 307 aa26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 HERVK_113P62684 666 aa26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 IRX3P78415 501 aaPredicted RBP26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 FOXP4Q8IVH2 680 aaPredicted RBP26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 MAPKAPK5Q8IW41 473 aa26.64■■□□□ 1.86
SMARCD1-212ENST00000551966 GPRC5AQ8NFJ5 357 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms