RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 RGS12O14924 1447 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 ARID4AP29374 1257 aaPredicted RBP13.23□□□□□ -0.29
LGR5-206ENST00000550851 ALDH1B1P30837 517 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 PDCL2Q8N4E4 241 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
LGR5-206ENST00000550851 AGLP35573 1532 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 MRPL12P52815 198 aaKnown RBP13.23□□□□□ -0.29
LGR5-206ENST00000550851 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
LGR5-206ENST00000550851 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 BTDP43251 543 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 ARID5AQ03989 594 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 GRM1Q13255 1194 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 USH1GQ495M9 461 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 DNAI1Q9UI46 699 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
LGR5-206ENST00000550851 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 CASQ1P31415 396 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 CCT6AP40227 531 aaKnown RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 ZNF445P59923 1031 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
LGR5-206ENST00000550851 TAF4BQ92750 862 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 INCENPQ9NQS7 918 aa13.22□□□□□ -0.29
LGR5-206ENST00000550851 MYL5Q02045 173 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
LGR5-206ENST00000550851 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
LGR5-206ENST00000550851 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
LGR5-206ENST00000550851 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
LGR5-206ENST00000550851 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 DBNDD1Q9H9R9 158 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.29
LGR5-206ENST00000550851 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
LGR5-206ENST00000550851 CHMP2AO43633 222 aa13.21□□□□□ -0.3
LGR5-206ENST00000550851 ATP2B4P23634 1241 aa13.21□□□□□ -0.3
LGR5-206ENST00000550851 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
LGR5-206ENST00000550851 ZBTB9Q96C00 473 aa13.21□□□□□ -0.3
LGR5-206ENST00000550851 CLIC6Q96NY7 704 aa13.21□□□□□ -0.3
LGR5-206ENST00000550851 A0A087WWV3 80 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 CLCN1P35523 988 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 CUL4AQ13619 759 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 SCARF1Q14162 830 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 PDE6BP35913 854 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 LAMC1P11047 1609 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
LGR5-206ENST00000550851 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
LGR5-206ENST00000550851 BAG6P46379 1132 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
LGR5-206ENST00000550851 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
LGR5-206ENST00000550851 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
LGR5-206ENST00000550851 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
LGR5-206ENST00000550851 SPAG1Q07617 926 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 VPS16Q9H269 839 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 XDHP47989 1333 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 CUTAO60888 179 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
LGR5-206ENST00000550851 TRAF1Q13077 416 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 AFF2P51816 1311 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
LGR5-206ENST00000550851 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 PRDX5P30044 214 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 NONOQ15233 471 aaKnown RBP eCLIP13.18□□□□□ -0.3
LGR5-206ENST00000550851 LRRC27Q9C0I9 530 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
LGR5-206ENST00000550851 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
LGR5-206ENST00000550851 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 ERLIN1O75477 346 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
LGR5-206ENST00000550851 CFBP00751 764 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms