RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 IGSF3O75054 1194 aa28.33■■■□□ 2.13
SMARCD1-209ENST00000550477 PI16Q6UXB8 463 aa28.33■■■□□ 2.13
SMARCD1-209ENST00000550477 ZNF280CQ8ND82 737 aa28.33■■■□□ 2.13
SMARCD1-209ENST00000550477 PXYLP1Q8TE99 480 aa28.33■■■□□ 2.13
SMARCD1-209ENST00000550477 DHX36Q9H2U1 1008 aaKnown RBP28.33■■■□□ 2.13
SMARCD1-209ENST00000550477 MCAMP43121 646 aa28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 FLT3LGP49771 235 aa28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 SPP2Q13103 211 aa28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 NAA16Q6N069 864 aaPredicted RBP28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 PI4KBQ9UBF8 816 aa28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 GABRQQ9UN88 632 aa28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 COL2A1P02458 1487 aaPredicted RBP28.32■■■□□ 2.12
SMARCD1-209ENST00000550477 USP17L5A8MUK1 530 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 CAP2P40123 477 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 IRF5Q13568 498 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 ANKRD13CQ8N6S4 541 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 ZNF384Q8TF68 577 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 TRIM34Q9BYJ4 488 aa28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.31■■■□□ 2.12
SMARCD1-209ENST00000550477 GCLCP48506 637 aaPredicted RBP28.3■■■□□ 2.12
SMARCD1-209ENST00000550477 FAM110CQ1W6H9 321 aa28.3■■■□□ 2.12
SMARCD1-209ENST00000550477 COLQQ9Y215 455 aaPredicted RBP28.3■■■□□ 2.12
SMARCD1-209ENST00000550477 PTPRFP10586 1907 aa28.3■■■□□ 2.12
SMARCD1-209ENST00000550477 H0YGN5 161 aa28.29■■■□□ 2.12
SMARCD1-209ENST00000550477 SLURP2P0DP57 97 aa28.29■■■□□ 2.12
SMARCD1-209ENST00000550477 ATP8B2P98198 1209 aa28.29■■■□□ 2.12
SMARCD1-209ENST00000550477 FTSJ3Q8IY81 847 aaKnown RBP28.29■■■□□ 2.12
SMARCD1-209ENST00000550477 SHISA4Q96DD7 197 aa28.29■■■□□ 2.12
SMARCD1-209ENST00000550477 BRCA2P51587 3418 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 FAM196BA6NMK8 535 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 SURF6O75683 361 aaKnown RBP28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 TNNI3KQ59H18 835 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 TMEM57Q8N5G2 664 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 U2AF1L4Q8WU68 220 aaKnown RBP28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 TAOK2Q9UL54 1235 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 NR2E3Q9Y5X4 410 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 FPGT-TNNI3KV9GXZ4 949 aa28.28■■■□□ 2.12
SMARCD1-209ENST00000550477 PHIPQ8WWQ0 1821 aa28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 SGPL1O95470 568 aa28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 TREML2Q5T2D2 321 aa28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 CCDC84Q86UT8 332 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 FOXP4Q8IVH2 680 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 SH3RF3Q8TEJ3 882 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 AATFQ9NY61 560 aaKnown RBP eCLIP28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-209ENST00000550477 TFRCP02786 760 aaKnown RBP28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 ASNSP08243 561 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 HMGCS2P54868 508 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 POLA2Q14181 598 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 CRACR2BQ8N4Y2 399 aaPredicted RBP28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 UNC93B1Q9H1C4 597 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 SNRKQ9NRH2 765 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 TMOD4Q9NZQ9 345 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 TNNQ9UQP3 1299 aa28.26■■■□□ 2.11
SMARCD1-209ENST00000550477 INHAP05111 366 aa28.25■■■□□ 2.11
SMARCD1-209ENST00000550477 PPP4CP60510 307 aa28.25■■■□□ 2.11
SMARCD1-209ENST00000550477 SSH3Q8TE77 659 aa28.25■■■□□ 2.11
SMARCD1-209ENST00000550477 GINM1Q9NU53 330 aa28.25■■■□□ 2.11
SMARCD1-209ENST00000550477 FARP2O94887 1054 aaPredicted RBP28.24■■■□□ 2.11
SMARCD1-209ENST00000550477 ELNP15502 786 aa28.24■■■□□ 2.11
SMARCD1-209ENST00000550477 FXR1P51114 621 aaKnown RBP eCLIP28.24■■■□□ 2.11
SMARCD1-209ENST00000550477 ZNF512BQ96KM6 892 aaPredicted RBP28.24■■■□□ 2.11
SMARCD1-209ENST00000550477 DBNDD2Q9BQY9 259 aa28.24■■■□□ 2.11
SMARCD1-209ENST00000550477 SH3D19Q5HYK7 790 aa28.23■■■□□ 2.11
SMARCD1-209ENST00000550477 TGFBRAP1Q8WUH2 860 aa28.23■■■□□ 2.11
SMARCD1-209ENST00000550477 C19orf81C9J6K1 198 aa28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 CEP290O15078 2479 aa28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 HLA-DOAP06340 250 aa28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 IRX3P78415 501 aaPredicted RBP28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 CERS3Q8IU89 383 aa28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 WDR18Q9BV38 432 aa28.22■■■□□ 2.11
SMARCD1-209ENST00000550477 MAPKAPK5Q8IW41 473 aa28.21■■■□□ 2.11
SMARCD1-209ENST00000550477 ITPRIPQ8IWB1 547 aa28.21■■■□□ 2.11
SMARCD1-209ENST00000550477 DEFB118Q96PH6 123 aa28.21■■■□□ 2.11
SMARCD1-209ENST00000550477 ASCC2Q9H1I8 757 aaPredicted RBP28.21■■■□□ 2.11
SMARCD1-209ENST00000550477 CYP2E1P05181 493 aaPredicted RBP28.2■■■□□ 2.1
SMARCD1-209ENST00000550477 BACE1P56817 501 aa28.2■■■□□ 2.1
SMARCD1-209ENST00000550477 CHRDL2Q6WN34 429 aa28.2■■■□□ 2.1
SMARCD1-209ENST00000550477 UBE2Q1Q7Z7E8 422 aa28.2■■■□□ 2.1
SMARCD1-209ENST00000550477 ATAD5Q96QE3 1844 aa28.2■■■□□ 2.1
SMARCD1-209ENST00000550477 DOCK3Q8IZD9 2030 aa28.19■■■□□ 2.1
SMARCD1-209ENST00000550477 NOP58Q9Y2X3 529 aaKnown RBP28.19■■■□□ 2.1
SMARCD1-209ENST00000550477 FLT1P17948 1338 aa28.18■■■□□ 2.1
SMARCD1-209ENST00000550477 USP17L10C9JJH3 530 aa28.18■■■□□ 2.1
SMARCD1-209ENST00000550477 MTMR2Q13614 643 aa28.18■■■□□ 2.1
SMARCD1-209ENST00000550477 EVI5O60447 810 aa28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 HMGCRP04035 888 aa28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 ZAP70P43403 619 aa28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 TMED8Q6PL24 325 aaPredicted RBP28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 CCAR1Q8IX12 1150 aaKnown RBP28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 PAK6Q9NQU5 681 aaPredicted RBP28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 PALD1Q9ULE6 856 aa28.17■■■□□ 2.1
SMARCD1-209ENST00000550477 CYP7A1P22680 504 aa28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 HOXA7P31268 230 aaPredicted RBP28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 HNRNPUQ00839 825 aaKnown RBP eCLIP28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 RRP1BQ14684 758 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 METTL16Q86W50 562 aaKnown RBP28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 GTF3C2Q8WUA4 911 aaPredicted RBP28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 C1orf115Q9H7X2 142 aa28.16■■■□□ 2.1
SMARCD1-209ENST00000550477 LOC285556D6RIA3 1793 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms