RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 COA7Q96BR5 231 aa12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 TBC1D2Q9BYX2 928 aa12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 PNMA3Q9UL41 463 aa12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 NOB1Q9ULX3 412 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-207ENST00000550051 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 A0A1B0GUL7 405 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 EVI5O60447 810 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 LDHCP07864 332 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 SLURP2P0DP57 97 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 MECOMQ03112 1051 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 ANKRD13CQ8N6S4 541 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 XAGE2Q96GT9 111 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
TRAFD1-207ENST00000550051 GSTO1P78417 241 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 SPP2Q13103 211 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 PICALMQ13492 652 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 MTX1Q13505 466 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 ANKLE1Q8NAG6 615 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 ZNF280CQ8ND82 737 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-207ENST00000550051 GNAI3P08754 354 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 BMP8BP34820 402 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 CAP2P40123 477 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 TFCP2Q12800 502 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 NECAB2Q7Z6G3 386 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 NSUN4Q96CB9 384 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 PAWRQ96IZ0 340 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 MEIS3Q99687 375 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
TRAFD1-207ENST00000550051 USP17L5A8MUK1 530 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 WDR18Q9BV38 432 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 LOC285556D6RIA3 1793 aa12.17□□□□□ -0.46
TRAFD1-207ENST00000550051 RPTORQ8N122 1335 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 GDF15Q99988 308 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 HMX1Q9NP08 348 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 PI4KBQ9UBF8 816 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
TRAFD1-207ENST00000550051 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 HMGCRP04035 888 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 HMGCS2P54868 508 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 DHX36Q9H2U1 1008 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
TRAFD1-207ENST00000550051 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 C19orf81C9J6K1 198 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 IGSF3O75054 1194 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 UQCRFS1P1P0C7P4 283 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 BACE1P56817 501 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 PPP4CP60510 307 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
TRAFD1-207ENST00000550051 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 ASNSP08243 561 aa12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 MCAMP43121 646 aa12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 DIS3LQ8TF46 1054 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 P2RX7Q99572 595 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms