RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 DDX4Q9NQI0 724 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 GJD2Q9UKL4 321 aa12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-212ENST00000549173 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 BTDP43251 543 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 SH3D19Q5HYK7 790 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 DIS3LQ8TF46 1054 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 STXBP5LQ9Y2K9 1186 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 COL6A3P12111 3177 aa12.17□□□□□ -0.46
CALCOCO1-212ENST00000549173 GNAI3P08754 354 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 XRCC5P13010 732 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 RHBDL3P58872 404 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 SPP2Q13103 211 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 RASGRF1Q13972 1273 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 C7orf61Q8IZ16 206 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 TDHQ8IZJ6 230 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 SIL1Q9H173 461 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 ABCF2Q9UG63 623 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
CALCOCO1-212ENST00000549173 DOCK3Q8IZD9 2030 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 LDHCP07864 332 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 CAP2P40123 477 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 GSTO1P78417 241 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 PICALMQ13492 652 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 MVPQ14764 893 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
CALCOCO1-212ENST00000549173 DDX60LQ5H9U9 1706 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 ADORA1P30542 326 aa12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 MECOMQ03112 1051 aa12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
CALCOCO1-212ENST00000549173 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 COL6A1P12109 1028 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 HMGCS2P54868 508 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 TRIB2Q92519 343 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 GINM1Q9NU53 330 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 MTMR10Q9NXD2 777 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
CALCOCO1-212ENST00000549173 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 IGSF3O75054 1194 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 ASNSP08243 561 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 MAPK4P31152 587 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 BACE1P56817 501 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 TIMM10P62072 90 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 TRIM32Q13049 653 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 FAM109BQ6ICB4 259 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 MIER1Q8N108 512 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
CALCOCO1-212ENST00000549173 PFASO15067 1338 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 IRX3P78415 501 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 MTX1Q13505 466 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 METTL16Q86W50 562 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 USP6NLQ92738 828 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 TMOD4Q9NZQ9 345 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-212ENST00000549173 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
CALCOCO1-212ENST00000549173 SYN1P17600 705 aa12.1□□□□□ -0.47
CALCOCO1-212ENST00000549173 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CALCOCO1-212ENST00000549173 ARID4AP29374 1257 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO1-212ENST00000549173 HERVK_113P62684 666 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms