RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PDE6AP16499 860 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 ITGA6P23229 1130 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 SMARCE1Q969G3 411 aa11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-205ENST00000548573 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 BTBD18B2RXH4 712 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 NR1I3Q14994 352 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 CC2D1AQ6P1N0 951 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 DIS3L2Q8IYB7 885 aaKnown RBP11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 PDILTQ8N807 584 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 RABGGTAQ92696 567 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 AIDAQ96BJ3 306 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 WDR24Q96S15 920 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 MTA3Q9BTC8 594 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 KRT23Q9C075 422 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 CNNM1Q9NRU3 951 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
SMARCD1-205ENST00000548573 IFIT3O14879 490 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 POLR2DO15514 142 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 PDE8BO95263 885 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 JAKMIP3Q5VZ66 844 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 TOGARAM2Q6ZUX3 1019 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 GREM2Q9H772 168 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 CEP131Q9UPN4 1083 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 SRPRBQ9Y5M8 271 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 PLCD1P51178 756 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 RCAN1P53805 252 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 CTSWP56202 376 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 TOM1L2Q6ZVM7 507 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
SMARCD1-205ENST00000548573 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 ERICH4A6NGS2 130 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 DEXIO95424 95 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 CCDC175P0C221 793 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 IL2RBP14784 551 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 GOLGA1Q92805 767 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 NAA15Q9BXJ9 866 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 NAPBQ9H115 298 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 CHD4Q14839 1912 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 AKR1B15C9JRZ8 316 aaPredicted RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 SEC31AO94979 1220 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 PHKA1P46020 1223 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 GRIN1Q05586 938 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 RTN1Q16799 776 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 MED15Q96RN5 788 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
SMARCD1-205ENST00000548573 MYH3P11055 1940 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 SASH3O75995 380 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 STAG1Q8WVM7 1258 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 LPIN2Q92539 896 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 KCNJ14Q9UNX9 436 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 DOCK2Q92608 1830 aa11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.61
SMARCD1-205ENST00000548573 CCDC151A5D8V7 595 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms