RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 PRDM1O75626 825 aa20.39■□□□□ 0.85
KRT4-201ENST00000548097 STOX1Q6ZVD7 989 aa20.39■□□□□ 0.85
KRT4-201ENST00000548097 TRAF5O00463 557 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 ADCK5Q3MIX3 580 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 TTC6Q86TZ1 520 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 AMOTL1Q8IY63 956 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 SNX14Q9Y5W7 946 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
KRT4-201ENST00000548097 ATRNL1Q5VV63 1379 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 KIF3CO14782 793 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 HLA-DOAP06340 250 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 LDHDQ86WU2 507 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 DHX36Q9H2U1 1008 aaKnown RBP20.37■□□□□ 0.85
KRT4-201ENST00000548097 DNAJC18Q9H819 358 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
KRT4-201ENST00000548097 PRKG1Q13976 671 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 ZNF784Q8NCA9 323 aaPredicted RBP20.37■□□□□ 0.85
KRT4-201ENST00000548097 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
KRT4-201ENST00000548097 NEDD4P46934 1319 aa20.36■□□□□ 0.85
KRT4-201ENST00000548097 E7EWF7 191 aa20.36■□□□□ 0.85
KRT4-201ENST00000548097 RRP12Q5JTH9 1297 aaKnown RBP20.36■□□□□ 0.85
KRT4-201ENST00000548097 CRACR2BQ8N4Y2 399 aaPredicted RBP20.36■□□□□ 0.85
KRT4-201ENST00000548097 TOMM22Q9NS69 142 aa20.36■□□□□ 0.85
KRT4-201ENST00000548097 SERPINB13Q9UIV8 391 aa20.36■□□□□ 0.85
KRT4-201ENST00000548097 MCCP23508 829 aa20.35■□□□□ 0.85
KRT4-201ENST00000548097 CDC37L1Q7L3B6 337 aa20.35■□□□□ 0.85
KRT4-201ENST00000548097 ANAPC4Q9UJX5 808 aa20.35■□□□□ 0.85
KRT4-201ENST00000548097 COL2A1P02458 1487 aaPredicted RBP20.35■□□□□ 0.85
KRT4-201ENST00000548097 EIF5BO60841 1220 aaKnown RBP20.34■□□□□ 0.85
KRT4-201ENST00000548097 CPA1P15085 419 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 CDK8P49336 464 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 GABPAQ06546 454 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 AKNAD1Q5T1N1 836 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 RNF20Q5VTR2 975 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 CDCA5Q96FF9 252 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
KRT4-201ENST00000548097 SHROOM1Q2M3G4 852 aaPredicted RBP20.34■□□□□ 0.85
KRT4-201ENST00000548097 C16orf86Q6ZW13 317 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 KCNB2Q92953 911 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
KRT4-201ENST00000548097 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.85
KRT4-201ENST00000548097 RRP1BQ14684 758 aaKnown RBP20.33■□□□□ 0.85
KRT4-201ENST00000548097 MFSD6Q6ZSS7 791 aa20.33■□□□□ 0.85
KRT4-201ENST00000548097 STAG1Q8WVM7 1258 aa20.33■□□□□ 0.85
KRT4-201ENST00000548097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.33■□□□□ 0.85
KRT4-201ENST00000548097 PPP2R3BQ9Y5P8 575 aa20.33■□□□□ 0.85
KRT4-201ENST00000548097 ROBO3Q96MS0 1386 aa20.33■□□□□ 0.84
KRT4-201ENST00000548097 B4E1Z4 1266 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 SHMT1P34896 483 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 FAM47AQ5JRC9 791 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 CHST3Q7LGC8 479 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 TRIM34Q9BYJ4 488 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 MKNK2Q9HBH9 465 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
KRT4-201ENST00000548097 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
KRT4-201ENST00000548097 JAKMIP1Q96N16 626 aaKnown RBP20.32■□□□□ 0.84
KRT4-201ENST00000548097 KIF2CQ99661 725 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 EHD4Q9H223 541 aa20.32■□□□□ 0.84
KRT4-201ENST00000548097 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
KRT4-201ENST00000548097 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.32■□□□□ 0.84
KRT4-201ENST00000548097 SLC3A2P08195 630 aaKnown RBP20.31■□□□□ 0.84
KRT4-201ENST00000548097 PDE4BQ07343 736 aa20.31■□□□□ 0.84
KRT4-201ENST00000548097 MOB2Q70IA6 237 aa20.31■□□□□ 0.84
KRT4-201ENST00000548097 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
KRT4-201ENST00000548097 RANBP6O60518 1105 aaKnown RBP20.3■□□□□ 0.84
KRT4-201ENST00000548097 GDF11O95390 407 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
KRT4-201ENST00000548097 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.3■□□□□ 0.84
KRT4-201ENST00000548097 KDM4AO75164 1064 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 RASA1P20936 1047 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 JAG1P78504 1218 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 TSGA10IPQ3SY00 556 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 METTL16Q86W50 562 aaKnown RBP20.3■□□□□ 0.84
KRT4-201ENST00000548097 ZKSCAN3Q9BRR0 538 aa20.3■□□□□ 0.84
KRT4-201ENST00000548097 ITGBL1O95965 494 aaPredicted RBP20.29■□□□□ 0.84
KRT4-201ENST00000548097 FGRP09769 529 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 AKR1B1P15121 316 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
KRT4-201ENST00000548097 SUPT20HL1Q3ZLR7 823 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
KRT4-201ENST00000548097 HERC5Q9UII4 1024 aaKnown RBP20.29■□□□□ 0.84
KRT4-201ENST00000548097 MYH8P13535 1937 aa20.29■□□□□ 0.84
KRT4-201ENST00000548097 NCOA7Q8NI08 942 aa20.28■□□□□ 0.84
KRT4-201ENST00000548097 LRRC2Q9BYS8 371 aa20.28■□□□□ 0.84
KRT4-201ENST00000548097 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
KRT4-201ENST00000548097 NMT2O60551 498 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 TFAP4Q01664 338 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 TRDNQ13061 729 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.84
KRT4-201ENST00000548097 ZSWIM5Q9P217 1185 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 PHF20L1A8MW92 1017 aa20.27■□□□□ 0.84
KRT4-201ENST00000548097 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms