RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 PARD6AQ9NPB6 346 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 SNX11Q9Y5W9 270 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 IGHA2P01877 340 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 KCNN1Q92952 543 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 HEXIM2Q96MH2 286 aaKnown RBP5.48□□□□□ -1.53
HCFC2-203ENST00000547194 RBCK1Q9BYM8 510 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 TNKS2Q9H2K2 1166 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 NPHS2Q9NP85 383 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 DISC1Q9NRI5 854 aa5.48□□□□□ -1.53
HCFC2-203ENST00000547194 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
HCFC2-203ENST00000547194 CPNE3O75131 537 aaKnown RBP5.47□□□□□ -1.53
HCFC2-203ENST00000547194 SLFN14P0C7P3 912 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 KIAA0319Q5VV43 1072 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.47□□□□□ -1.53
HCFC2-203ENST00000547194 SPACA3Q8IXA5 215 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 TMC1Q8TDI8 760 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 DMRTB1Q96MA1 342 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 DNAJC25Q9H1X3 360 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 PCOLCE2Q9UKZ9 415 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 IVNS1ABPQ9Y6Y0 642 aa5.47□□□□□ -1.53
HCFC2-203ENST00000547194 PATL2C9JE40 543 aaKnown RBP5.46□□□□□ -1.54
HCFC2-203ENST00000547194 GPR182O15218 404 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 B3GALT4O96024 378 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 SYN1P17600 705 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 GGNQ86UU5 652 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 ALKBH8Q96BT7 664 aaKnown RBP5.46□□□□□ -1.54
HCFC2-203ENST00000547194 NIF3L1Q9GZT8 377 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 EHD4Q9H223 541 aa5.46□□□□□ -1.54
HCFC2-203ENST00000547194 GNAT3A8MTJ3 354 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 EIF1AYO14602 144 aaKnown RBP5.45□□□□□ -1.54
HCFC2-203ENST00000547194 ZNF862O60290 1169 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 NEFMP07197 916 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 PRRT2Q7Z6L0 340 aaPredicted RBP5.45□□□□□ -1.54
HCFC2-203ENST00000547194 AEBP1Q8IUX7 1158 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 ISL2Q96A47 359 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 ZNF576Q9H609 170 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 C19orf73Q9NVV2 129 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 BIN2Q9UBW5 565 aaPredicted RBP5.45□□□□□ -1.54
HCFC2-203ENST00000547194 GTF2IRD1Q9UHL9 959 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 DCTN4Q9UJW0 460 aa5.45□□□□□ -1.54
HCFC2-203ENST00000547194 AP3B2Q13367 1082 aa5.44□□□□□ -1.54
HCFC2-203ENST00000547194 NFIXQ14938 502 aa5.44□□□□□ -1.54
HCFC2-203ENST00000547194 NKPD1Q17RQ9 610 aa5.44□□□□□ -1.54
HCFC2-203ENST00000547194 ATP13A1Q9HD20 1204 aa5.44□□□□□ -1.54
HCFC2-203ENST00000547194 CDKAL1Q5VV42 579 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 TMC7Q7Z402 723 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 ABHD4Q8TB40 342 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 CCDC74AQ96AQ1 378 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 CNTNAP4Q9C0A0 1308 aa5.43□□□□□ -1.54
HCFC2-203ENST00000547194 GADD45BO75293 160 aaPredicted RBP5.42□□□□□ -1.54
HCFC2-203ENST00000547194 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
HCFC2-203ENST00000547194 GLDCP23378 1020 aa5.42□□□□□ -1.54
HCFC2-203ENST00000547194 ITPKAP23677 461 aa5.42□□□□□ -1.54
HCFC2-203ENST00000547194 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
HCFC2-203ENST00000547194 PRPF40BQ6NWY9 871 aaKnown RBP5.42□□□□□ -1.54
HCFC2-203ENST00000547194 EPS8L3Q8TE67 593 aaKnown RBP5.42□□□□□ -1.54
HCFC2-203ENST00000547194 KCNB2Q92953 911 aa5.42□□□□□ -1.54
HCFC2-203ENST00000547194 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
HCFC2-203ENST00000547194 GDNFP39905 211 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 FAAP100Q0VG06 881 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 PI16Q6UXB8 463 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 HSPA12BQ96MM6 686 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 SLAMF8Q9P0V8 285 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
HCFC2-203ENST00000547194 FAM155AB1AL88 458 aaPredicted RBP5.4□□□□□ -1.54
HCFC2-203ENST00000547194 H3BS24 57 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 PSPNO60542 156 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 RAC2P15153 192 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 MAPK1P28482 360 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 CLCN7P51798 805 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 GRM2Q14416 872 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 DSC3Q14574 896 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 FAM214BQ7L5A3 538 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 TTC6Q86TZ1 520 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 SLC26A8Q96RN1 970 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 PRDM10Q9NQV6 1147 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 PCDHGC5Q9Y5F6 944 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 CSADQ9Y600 493 aa5.4□□□□□ -1.54
HCFC2-203ENST00000547194 SYNGAP1Q96PV0 1343 aa5.4□□□□□ -1.55
HCFC2-203ENST00000547194 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 TREHO43280 583 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 GSTP1P09211 210 aaKnown RBP5.39□□□□□ -1.55
HCFC2-203ENST00000547194 ERVFC1P60507 584 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 PLCB3Q01970 1234 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 KIF4BQ2VIQ3 1234 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 SKOR2Q2VWA4 1001 aaPredicted RBP5.39□□□□□ -1.55
HCFC2-203ENST00000547194 RPS26P11Q5JNZ5 115 aaPredicted RBP5.39□□□□□ -1.55
HCFC2-203ENST00000547194 PICK1Q9NRD5 415 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 NLRP2Q9NX02 1062 aa5.39□□□□□ -1.55
HCFC2-203ENST00000547194 HK2P52789 917 aa5.38□□□□□ -1.55
HCFC2-203ENST00000547194 FCGRTP55899 365 aa5.38□□□□□ -1.55
HCFC2-203ENST00000547194 ENOX2Q16206 610 aaKnown RBP5.38□□□□□ -1.55
HCFC2-203ENST00000547194 SND1Q7KZF4 910 aaKnown RBP eCLIP5.38□□□□□ -1.55
HCFC2-203ENST00000547194 NPAS4Q8IUM7 802 aa5.38□□□□□ -1.55
HCFC2-203ENST00000547194 ZSCAN29Q8IWY8 852 aaPredicted RBP5.38□□□□□ -1.55
HCFC2-203ENST00000547194 FOXQ1Q9C009 403 aa5.38□□□□□ -1.55
HCFC2-203ENST00000547194 PRDM5Q9NQX1 630 aaPredicted RBP5.38□□□□□ -1.55
HCFC2-203ENST00000547194 PODXL2Q9NZ53 605 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms